Haemophilus influenzae HI1408 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Haemophilus influenzae HI1408 RM systems
Ref: Whitby,P.W. et al. PLoS ONE 10 (9), E0136867 (2015)
REBASE ref # 20926
Contig set: 1,901,953 bp
GenBank #: LFDJ00000000 (NZ_LFDJ00000000)
REBASE acronym: Hin1408
Org_num: 17504
All begin ABN48_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1885 | portal vertex protein | |||
| 1890 | R | HinfORFCP (97% identity) | Hin1408ORF1915P | |
| 1895 | 77 aa hypothetical protein CGSHiGG_01545 | |||
| 1900 | 74 aa hypothetical protein CK45_03755 | |||
| 1905 | 174 aa hypothetical protein | |||
| 1910 | S | S.Hha10839ORF1378P (74% identity) | S.Hin1408ORF1915P | |
| 1915 | M | M.HseH68ORF6985P (94% identity) | M.Hin1408ORF1915P | |
| 1920 | ribosome-binding factor A | |||
| 6600 | 257 aa hypothetical protein | |||
| 6605 | R | Hha201919ORF1730P (97% identity) | Hin1408ORF6620P | |
| 6610 | S | S.Hha201919ORF1730P (67% identity) | S.Hin1408ORF6620P | |
| 6615 | pseudogene | |||
| 6620 | M | M.Hha201919ORF1730P (97% identity) | M.Hin1408ORF6620P | |
| 6625 | 30S ribosomal protein S16 | |||
| 8210 | oligopeptidase A | |||
| 8215 | M | M.HinIII8ORF7870P (100% identity) | M.Hin1408ORF8215P | |
| 8220 | S | S.HinIII8ORF7870P (100% identity) | S.Hin1408ORF8215P | |
| 8225 | 2-hydroxyacid dehydrogenase | |||
| 8230 | R | Hin8759ORF6800P (99% identity) | Hin1408ORF8215P | |
| 8235 | membrane protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 85 | Mu-like prophage FluMu protein com | |||
| 90 | M | M.Hin1426ORF3935P (100% identity) | BA | M.Hin1408ORF90P |
| 95 | 87 aa hypothetical protein | |||
| 4585 | 138 aa hypothetical protein | |||
| 4590 | M | M1.HinIII6ORF10280P (98% identity) | M1.Hin1408ORF4590P | |
| 4595 | M | M2.HseH68ORF7775P (97% identity) | M2.Hin1408ORF4590P | |
| 4600 | RM | Hin12699ORF856P (97% identity) | Hin1408ORF4590P | |
| 4605 | transporter | |||
| 6575 | molybdenum cofactor guanylyltransferase | |||
| 6580 | M | M.HinIII6ORF4860P (100% identity) | GATC | M.Hin1408ORF6580P |
| 6585 | 3-dehydroquinate synthase | |||
| 7195 | valine--tRNA ligase | |||
| 7200 | R | Hin9224ORF6935P (100% identity) | GCGC | Hin1408ORF7205P |
| 7205 | M | M.Hin9224ORF6935P (100% identity) | GCGC | M.Hin1408ORF7205P |
| 7210 | pseudogene | |||
| 2465 | replication P | |||
| 2470 | M | M.Hin12194ORF684P (95% identity) | GATC | M.Hin1408ORF2470P |
| 2475 | 307 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1620 | 155 aa hypothetical protein | |||
| 1625 | M | M.Hin1426ORF5700P (98% identity) | M.Hin1408ORF1625P | |
| 1630 | R | Cho10426ORF1522P (28% identity) | Hin1408ORF1625P | |
| 1635 | ATP-dependent helicase | |||