Photorhabdus heterorhabditis VMG |
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Putative Photorhabdus heterorhabditis VMG RM systems
Ref: Naidoo,S. et al. Genome Announc 3 (5), e01279-15 (2015)
REBASE ref # 20913
Contig set: 4,878,919 bp
GenBank #: LJCS00000000 (NZ_LJCS00000000)
REBASE acronym: PheVMG
Org_num: 17479
All begin AM629_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 7995 | DNA helicase | |||
| 8000 | R | Pte15199ORF10755P (91% identity) | PheVMGORF8010P | |
| 8005 | S | S.Nsp79ORF3361P (46% identity) | S.PheVMGORF8010P | |
| 8010 | M | M.Pte15199ORF10755P (90% identity) | M.PheVMGORF8010P | |
| 8015 | 204 aa hypothetical protein | |||
| 8600 | 1083 aa hypothetical protein | |||
| 8605 | R | PasAORF3937P (95% identity) | PheVMGORF8610P | |
| 8610 | M | M.PasAORF3937P (93% identity) | M.PheVMGORF8610P | |
| 8615 | S | S.PasAORF3937P (55% identity) | S.PheVMGORF8610P | |
| 8620 | 87 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17525 | M | DNA adenine methylase | M.PheVMGORF17525P | |
| 17530 | antiterminator | |||
| 8850 | 143 aa hypothetical protein | |||
| 8855 | M | M.PluTIII (95% identity) | AGGCCT | M.PheVMGORF8855P |
| 8860 | prevent-host-death protein | |||
| 10470 | ribulose phosphate epimerase | |||
| 10475 | M | M.PluLN2DamP (95% identity) | GATC | M.PheVMGDamP |
| 10480 | 305 aa hypothetical protein | |||
| 11280 | alkaline phosphatase | |||
| 11285 | RM | type II restriction endonuclease | PheVMGORF11285P | |
| 11290 | DNA repair protein | |||
| 2265 | 62 aa hypothetical protein | |||
| 2270 | M | M.XneSORF1600P (80% identity) | CTGAAG | M.PheVMGORF2270P |
| 2275 | RM | Xsp328ORF735P (78% identity) | CTGAAG | PheVMGORF2270P |
| 2280 | DNA primase | |||
| 845 | 79 aa hypothetical protein | |||
| 850 | M | M2.PmiHORF3142P (52% identity) | GCGATG | M1.PheVMGORF850P |
| 855 | M | M1.PmiHORF3142P (48% identity) | GCGATG | M2.PheVMGORF850P |
| 860 | RM | PmiHORF3142P (65% identity) | GCGATG | PheVMGORF850P |
| 865 | glycine dehydrogenase | |||