Fusobacterium nucleatum subsp. polymorphum ChDC F319 |
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Putative Fusobacterium nucleatum subsp. polymorphum ChDC F319 RM systems
Ref: Kook,J.-K. et al. unpublished
REBASE ref # 20383
Complete sequence: 2,469,901 bp
GenBank #: CP013328
REBASE acronym: FnuF319
Org_num: 17492
All begin RN93_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6860 | ArsR family transcriptional regulator | |||
| 6865 | R | FnuB17IVP (100% identity) | FnuF319ORF6890P | |
| 6870 | integrase | |||
| 6875 | cell filamentation protein Fic | |||
| 6880 | S | S2.FnuB17IV (100% identity) | S2.FnuF319ORF6890P | |
| 6885 | S | S1.FnuB17IVP (100% identity) | S3.FnuF319ORF6890P | |
| 6890 | M | M.FnuB17IV (100% identity) | M.FnuF319ORF6890P | |
| 6895 | zinc ABC transporter permease | |||
| 8990 | flotillin | |||
| 8995 | R | Fnu1281IIP (100% identity) | FnuF319ORF9015P | |
| 9000 | S | S2.FpoC48PORF4310P (96% identity) | S1.FnuF319ORF9015P | |
| 9005 | S | S1.FpoC48PORF4310P (95% identity) | S2.FnuF319ORF9015P | |
| 9010 | ATP-dependent DNA helicase RecG | |||
| 9015 | M | M.Fpo149AORF9350P (100% identity) | M.FnuF319ORF9015P | |
| 9020 | 116 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 630 | biotin--acetyl-CoA-carboxylase ligase | |||
| 635 | M | M.FnuB17III (100% identity) | GCATC | M.FnuF319ORF635P |
| 640 | 425 aa hypothetical protein | |||
| 1345 | 121 aa hypothetical protein | |||
| 1350 | M | M.Fnu306ORF10660P (100% identity) | M.FnuF319ORF1350P | |
| 1355 | 463 aa hypothetical protein | |||
| 6790 | ATP-dependent helicase | |||
| 6795 | RM | FnuSB6ORF4470P (100% identity) | FnuF319ORF6795P | |
| 6800 | 723 aa hypothetical protein | |||
| 8515 | 483 aa hypothetical protein | |||
| 8520 | M | M2.Fnu306ORF75P (100% identity) | GATC | M1.FnuF319ORF8520P |
| 8525 | R | Fnu306ORF75P (100% identity) | GATC | FnuF319ORF8520P |
| 8530 | M | M1.Fnu306ORF75P (100% identity) | GATC | M2.FnuF319ORF8520P |
| 8535 | 84 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2030 | carbon starvation protein CstA | |||
| 2035 | R | Fnu306McrBP (100% identity) | FnuF319McrBP | |
| 2040 | R | FnuB17McrCP (100% identity) | FnuF319McrCP | |
| 2045 | 939 aa hypothetical protein | |||