Lysobacter gummosus 3.2.11 |
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Putative Lysobacter gummosus 3.2.11 RM systems
Ref: de Bruijn,I. et al. BMC Genomics (2016)
REBASE ref # 20837
Complete sequence: 6,056,618 bp
GenBank #: CP011131
REBASE acronym: Lgu3211
Org_num: 17389
All begin LG3211_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1197 | 73 aa hypothetical protein | |||
| 1198 | R | Lgu1011ORF5605P (100% identity) | Lgu3211ORF1200P | |
| 1199 | 66 aa hypothetical protein | |||
| 1200 | M | M.Lgu1011ORF5605P (100% identity) | M.Lgu3211ORF1200P | |
| 1201 | S | S1.Lgu1011ORF5605P (54% identity) | S.Lgu3211ORF1200P | |
| 1202 | 49 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1046 | prolyl oligopeptidase family protein | |||
| 1048 | R | Lgu1011ORF4870P (100% identity) | GTCGAC | Lgu3211ORF1049P |
| 1049 | M | M.Lgu1011ORF4870P (99% identity) | GTCGAC | M.Lgu3211ORF1049P |
| 1050 | 100 aa hypothetical protein | |||
| 4891 | conserved hypothetical protein | |||
| 4892 | M | M1.Lgu1011ORF22815P (100% identity) | M1.Lgu3211ORF4892P | |
| 4893 | M | M2.Lgu1011ORF22815P (100% identity) | M2.Lgu3211ORF4892P | |
| 4894 | nematode fatty acid retinoid binding family | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4366 | peptidase M20/M25/M40 family protein | |||
| 4367 | R | Lgu1011McrCP (76% identity) | Lgu3211McrCP | |
| 4368 | R | Lgu1011McrBP (75% identity) | Lgu3211McrBP | |
| 4369 | bacterial regulatory helix-turn-helix, lysR | |||