Propionibacterium acidipropionici CGMCC 1.2230 |
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Putative Propionibacterium acidipropionici CGMCC 1.2230 RM systems
Ref: Liu,L. unpublished
REBASE ref # 20855
Complete sequence: 3,651,382 bp
GenBank #: CP013126
REBASE acronym: Pac2230
Org_num: 17424
All begin ASQ49_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1040 | 653 aa hypothetical protein | |||
| 1045 | M | M.Pac4875ORF7550P (99% identity) | GAAYNNNNNTCC | M.Pac2230III |
| ??? | S | S.Pac4875ORF7550P (100% identity) | GAAYNNNNNTCC | S.Pac2230III |
| 1055 | R | Aac1105ORF13920P (100% identity) | GAAYNNNNNTCC | Pac2230IIIP |
| 1060 | 72 aa hypothetical protein | |||
| 2695 | 179 aa hypothetical protein | |||
| 2700 | M | M.Aac1105ORF12250P (100% identity) | CAGNNNNNNCTT | M.Pac2230I |
| 2705 | S | S.Aac1105ORF12250P (100% identity) | CAGNNNNNNCTT | S.Pac2230I |
| 2710 | R | Aac1105ORF12250P (99% identity) | CAGNNNNNNCTT | Pac2230IP |
| 2715 | 490 aa hypothetical protein | |||
| 11360 | antitoxin HicB | |||
| ??? | S | S.Rae11412ORF2447P (49% identity) | S.Pac2230ORF11365P | |
| 11375 | 450 aa hypothetical protein | |||
| 12840 | 210 aa hypothetical protein | |||
| 12850 | M | M.Pac4875ORF17420P (100% identity) | M.Pac2230ORF12850P | |
| ??? | S | S.Aac1105ORF2045P (100% identity) | S1.Pac2230ORF12850P | |
| 12855 | pseudogene | |||
| 12860 | transposase | |||
| ??? | Uncharacterized protein | |||
| 12865 | R | Pac4875ORF17420P (100% identity) | Pac2230ORF12850P | |
| 12870 | metal-dependent hydrolase | |||
| 15910 | 354 aa hypothetical protein | |||
| 15915 | R | Pac4875ORF10550P (100% identity) | GCAYNNNNCTC | Pac2230IIP |
| ??? | S | S.Pac4875ORF10550P (100% identity) | GCAYNNNNCTC | S.Pac2230II |
| 15925 | M | M.Pac4875ORF10550P (100% identity) | GCAYNNNNCTC | M.Pac2230II |
| 15930 | GTP-binding protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3165 | transposase | |||
| ??? | RM | Aac1105ORF11770P (45% identity) | Pac2230ORF3170BP | |
| ??? | RM | PfrJS12aV (53% identity) | Pac2230ORF3170AP | |
| 3175 | 101 aa hypothetical protein | |||
| 3420 | helicase | |||
| 3425 | M | M2.Aac1105ORF11495P (100% identity) | GCCGGC | M1.Pac2230ORF3425P |
| 3430 | M | M1.Aac1105ORF11495P (100% identity) | GCCGGC | M2.Pac2230ORF3425P |
| 3435 | 915 aa hypothetical protein | |||
| 3430 | DNA methyltransferase | |||
| 3435 | M | M.Aac1105ORF11490P (96% identity) | M.Pac2230ORF3435P | |
| 3440 | 1129 aa hypothetical protein | |||
| 3455 | 1042 aa hypothetical protein | |||
| 3460 | V | V.Ana1037ORF6165P (63% identity) | V.Pac2230ORF3455P | |
| 3465 | 443 aa hypothetical protein | |||