Thermococcus barophilus CH5 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Thermococcus barophilus CH5 RM systems
Ref: Oger,P.M. et al. unpublished
REBASE ref # 21352
Complete sequence: 2,388,527 bp
GenBank #: CP013050
REBASE acronym: TbaCH5
Org_num: 17412
All begin TBCH5v1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 24 | 69 aa hypothetical protein | |||
| 25 | M | M.TbaMPORF1595P (98% identity) | M.TbaCH5ORF25P | |
| 26 | 75 aa hypothetical protein | |||
| 27 | 206 aa hypothetical protein | |||
| 28 | 61 aa hypothetical protein | |||
| 29 | S | S.TbaMPORF1595P (65% identity) | S.TbaCH5ORF25P | |
| 30 | 72 aa hypothetical protein | |||
| 31 | 65 aa hypothetical protein | |||
| 32 | ribonuclease VapC6 | |||
| 33 | R | TbaMPORF1595P (98% identity) | TbaCH5ORF25P | |
| 34 | Zinc-dependent protease | |||
| 2149 | DNA helicase | |||
| 2150 | R | TspP6ORF1350P (51% identity) | TbaCH5ORF2154P | |
| 2151 | S | S.MviT80ORF3443P (55% identity) | S.TbaCH5ORF2154P | |
| 2152 | 159 aa hypothetical protein | |||
| 2153 | 532 aa hypothetical protein | |||
| 2154 | M | M.TspP6ORF1350P (65% identity) | M.TbaCH5ORF2154P | |
| 2155 | 178 aa hypothetical protein | |||
| 2155 | 178 aa hypothetical protein | |||
| 2156 | S | type I restriction-modification enzyme, S | S.TbaCH5ORF2157P | |
| 2157 | M | Site-specific DNA-methyltransferase | M.TbaCH5ORF2157P | |
| 2158 | 427 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 680 | Cysteine--tRNA ligase | |||
| 681 | RM | TkoTS900ORF7425P (61% identity) | TbaCH5ORF681P | |
| 682 | conserved membrane hypothetical protein | |||
| 835 | 95 aa hypothetical protein | |||
| 836 | M | M.TbaMPORF711P (99% identity) | M.TbaCH5ORF836P | |
| 837 | conserved exported hypothetical protein | |||
| 1632 | T/G-specific DNA glycosylase | |||
| 1633 | M | M.TspCL1ORF1080P (74% identity) | CGGCCG | M.TbaCH5ORF1633P |
| 1634 | Phospholipase D/Transphosphatidylase | |||
| 1978 | 102 aa hypothetical protein | |||
| 1979 | RM | Tsp12cORFAP (61% identity) | TbaCH5ORF1979P | |
| 1980 | 223 aa hypothetical protein | |||
| 2165 | DNA polymerase II large subunit | |||
| 2166 | R | TspSY098ORF7545P (92% identity) | GGWCC | TbaCH5ORF2167P |
| 2167 | M | M.TspSY098ORF7545P (94% identity) | M.TbaCH5ORF2167P | |
| 2168 | DNA polymerase II small subunit | |||
| 2269 | 62 aa hypothetical protein | |||
| 2270 | M | M.TspSY098ORF7930P (91% identity) | CTAG | M.TbaCH5ORF2270P |
| 2271 | R | TspSY098ORF7930P (86% identity) | CTAG | TbaCH5ORF2270P |
| 2272 | 183 aa hypothetical protein | |||
| 2283 | 233 aa hypothetical protein | |||
| 2284 | M | M.TbaMPORF1959P (98% identity) | M.TbaCH5ORF2284P | |
| 2285 | 130 aa hypothetical protein | |||