Escherichia coli 2012C-4227 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli 2012C-4227 RM systems
Ref: Lindsey,R.L. et al. unpublished
REBASE ref # 21106
| Sequence length: | GenBank #: | |
| Chromosome: | 5,202,850 bp | CP013029 |
| plasmid unnamed1: | 74,656 bp | CP013028 |
| plasmid unnamed2: | 97,704 bp | CP013030 |
REBASE acronym: Eco2012
Org_num: 17410
All begin AKK22_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 245 | cell division protein DamX | |||
| 250 | M | DNA adenine methylase | GATC | M.Eco2012DamP |
| 255 | ribulose phosphate epimerase | |||
| 1610 | 407 aa hypothetical protein | |||
| 1615 | M | M.EcoSTEC405ORF22195P (87% identity) | CAGCTG | M.Eco2012ORF1615P |
| 1620 | 177 aa hypothetical protein | |||
| 2280 | ninB protein | |||
| ??? | M | M.EcoX21ORFCP (100% identity) | GATC | M.Eco2012ORF2285P |
| 2295 | antirepressor | |||
| 9485 | 27 aa hypothetical protein | |||
| 9490 | M | M.EcoPV0671ORF1339P (100% identity) | GATC | M.Eco2012ORF9490P |
| 9495 | cruciferin | |||
| 10285 | TrmB family transcriptional regulator | |||
| 10290 | M | M.EcoPV0671ORF1496P (100% identity) | M.Eco2012ORF10290P | |
| 10295 | pseudogene | |||
| 10620 | 70 aa hypothetical protein | |||
| 10625 | M | M.EcoPV0671ORF1559P (100% identity) | GATC | M.Eco2012ORF10625P |
| 10630 | regulator | |||
| 10730 | 214 aa hypothetical protein | |||
| 10735 | R | EcoPV0671ORF1581P (100% identity) | CTGCAG | Eco2012IP |
| 10740 | M | M.EcoSTEC032ORF17230P (100% identity) | CTGCAG | M.Eco2012I |
| 10745 | repressor | |||
| 15435 | multidrug DMT transporter | |||
| 15440 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Eco2012DcmP |
| 15445 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco2012DcmP |
| 15450 | hydrolase | |||
| 15765 | pseudogene | |||
| 15780 | M | M.EcoPV0671ORF2384P (100% identity) | M.Eco2012ORF15780P | |
| 15785 | transposase | |||
| 16750 | protein ninE | |||
| 16755 | M | M.EcoPV0671ORFAP (92% identity) | GATC | M.Eco2012ORF16755P |
| 16760 | transposase | |||
| 22775 | Fis family transcriptional regulator | |||
| 22780 | M | M.EcoPV0671ORF3749P (100% identity) | ATGCAT | M.Eco2012ORF22780P |
| 22785 | 59 aa hypothetical protein | |||
| plasmid unnamed1 | ||||
| 27120 | 103 aa hypothetical protein | |||
| 27125 | M | M.EcoPV0197ORF42P (100% identity) | M.Eco2012ORF27125P | |
| 27130 | 72 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 27860 | 63 aa hypothetical protein | |||
| 27880 | M | M.Eco3492AORFFP (100% identity) | M.Eco2012ORF27880P | |
| 27885 | DNA recombinase | |||