Ref: Lucas,S. et al. unpublished

REBASE ref # 10646

Sequence length:GenBank #:
chromosome 1: 3,942,557 bp CP001068 (NC_010682)
chromosome 2: 1,302,238 bp CP001069 (NC_010678)

REBASE acronym: RpiJ

Org_num: 5092

 

All begin Rpic_

Type I
ORF Gene Most similar Specificity Name
 
chromosome 1
 
446 358 aa hypothetical protein
447 R RpiH2Cu2ORF3535P (0% identity) RpiJORF450P
448 S S.RspOR214ORF4717P (0% identity) S.RpiJORF450P
449 anticodon nuclease
450 M M.RspOR214ORF4717P (0% identity) M.RpiJORF450P
451 136 aa hypothetical protein
 
3171 156 aa conserved hypothetical protein
3172 R RpiH2Cu5ORF14735P (0% identity) RpiJORF3176P
3173 S S.RpiH2Cu5ORF14735P (1% identity) S.RpiJORF3176P
3174 UvrD/REP helicase
3175 SMC domain protein
3176 M M.RpiH2Cu5ORF14735P (0% identity) M2.RpiJORF3176P
3177 263 aa hypothetical protein
3178 M M.RpiH2Cu5ORF14755P (1% identity) M1.RpiJORF3176P
3179 addiction module toxin, RelE/StbE family
 
3449 122 aa hypothetical protein
3450 R RspOR214ORF1436P (0% identity) RpiJORF3450P
3451 5-Nucleotidase domain protein
Type II
ORF Gene Most similar Specificity Name
 
chromosome 1
 
3 DNA gyrase, B subunit
4 M M.RpiH2Cu5ORF17745P (1% identity) M.RpiJORF4P
5 144 aa hypothetical protein
 
442 141 aa hypothetical protein
443 M M.BpsBEZORF1260P (0% identity) M.RpiJORF443P
444 132 aa hypothetical protein
 
2135 tryptophan synthase, alpha subunit
2136 M M.RpiH2Cu5ORF9955P (1% identity) M.RpiJORF2136P
2137 tryptophan synthase, beta subunit
 
2351 124 aa hypothetical protein
2352 M M.CmeNi2ORF4660P (0% identity) M1.RpiJORF2352P
2353 M M.RpiJORF2353P (1% identity) M2.RpiJORF2352P
2354 116 aa conserved hypothetical protein
 
2352 C-5 cytosine-specific DNA methylase
2353 M M2.RpiJORF2352P (1% identity) M.RpiJORF2353P
2354 116 aa conserved hypothetical protein
Type IV
ORF Gene Most similar Specificity Name
 
chromosome 2
 
3870 pseudogene
3871 R RpiDMrrP (1% identity) RpiJMrrP
3872 DEAD/DEAH box helicase domain protein