Salmonella enterica subsp. enterica serovar Weltevreden 2511STDY5462388 |
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Putative Salmonella enterica subsp. enterica serovar Weltevreden 2511STDY5462388 RM systems
Ref:
REBASE ref # 22501
| Sequence length: | GenBank #: | |
| chromosome 1: | 5,062,936 bp | LN890518 |
| plasmid 2: | 98,756 bp | LN890519 |
REBASE acronym: Sen2388
Org_num: 17234
All begin ERS208985_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 4936 | membrane protein | |||
| 4938 | S | S.SenWORF4635P (100% identity) | GAANNNNNNNNTCGC | S.Sen2388ORF4939P |
| 4939 | M | M.SenWORF4635P (100% identity) | GAANNNNNNNNTCGC | M.Sen2388ORF4939P |
| 4940 | R | SenWORF4635P (99% identity) | GAANNNNNNNNTCGC | Sen2388ORF4939P |
| 4941 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1303 | metal-dependent phospho hydrolase | |||
| 1304 | M | M.SenWDcmP (100% identity) | CCWGG | M.Sen2388DcmP |
| 1305 | V | V.StyUK1DcmP (100% identity) | V.Sen2388DcmP | |
| 1306 | inner membrane transporter yedA | |||
| 2148 | crossover junction endodeoxyribonuclease | |||
| 2149 | M | M.SenWORF2003P (100% identity) | GATC | M.Sen2388ORF2149P |
| 2150 | phage protein | |||
| 3785 | Fis DNA-binding protein | |||
| 3786 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen2388ORF3786P |
| 3787 | protein yhdU | |||
| 3885 | ribulose-phosphate 3-epimerase | |||
| 3886 | M | DNA adenine methylase | GATC | M.Sen2388DamP |
| 3887 | DamX protein | |||
| 4702 | Uncharacterized protein y4aS | |||
| 4703 | M | M.SenWORF4408P (100% identity) | TGGCCA | M.Sen2388ORF4703P |
| 4704 | Uncharacterised protein | |||
| plasmid 2 | ||||
| 5017 | Uncharacterized protein yedK | |||
| 5018 | M | K07319 putative adenine-specific | M.Sen2388ORF5018P | |
| 5019 | Uncharacterized protein yubE | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 384 | metabolite transport protein | |||
| 385 | M | M.Sens770ORF9955P (100% identity) | CAGAG | M.Sen2388ORF385P |
| ??? | R | SenWORF340P (100% identity) | CAGAG | Sen2388ORF385P |
| 387 | cytoplasmic protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 4940 | type I restriction enzyme EcoKI subunit R | |||
| 4941 | R | StyTMrrP (100% identity) | Sen2388MrrP | |
| 4942 | membrane protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 2894 | Uncharacterised protein | |||
| 2895 | M | M.Cfr697ORF6445P (96% identity) | GATC | M.Sen2388ORF2895P |
| 2896 | phage integrase (pseudogene) | |||