Orientia tsutsugamushi Ikeda |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Orientia tsutsugamushi Ikeda RM systems
Ref: Nakayama,K. et al. DNA Res. 15 (4), 185-199 (2008)
REBASE ref # 10654
Complete sequence: 2,008,987 bp
GenBank #: AP008981 (NC_010793)
REBASE acronym: OtsI
Org_num: 5100
All begin OTT_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 317 | 182 aa hypothetical protein | |||
| 318 | M | M.OtsKatoORF781P (100% identity) | GATC | M.OtsIORF318P |
| 319 | 92 aa hypothetical protein | |||
| 345 | 93 aa hypothetical protein | |||
| 346 | M | M.OtsIORF668P (95% identity) | GATC | M.OtsIORF346P |
| 347 | 622 aa hypothetical protein | |||
| 440 | repeat-containing protein B | |||
| 441 | M | M.OtsKatoORF1465P (100% identity) | GATC | M.OtsIORF441P |
| 442 | 347 aa hypothetical protein | |||
| 667 | 242 aa hypothetical protein | |||
| 668 | M | M.OtsIORF1206P (100% identity) | GATC | M.OtsIORF668P |
| 669 | 93 aa hypothetical protein | |||
| 885 | 78 aa hypothetical protein | |||
| ??? | M | M.Ots2014ORF4410P (87% identity) | GATC | M.OtsIORF886P |
| 887 | repeat-containing protein A_04 | |||
| 983 | 182 aa hypothetical protein | |||
| 984 | M | M.OtsKatoORF781P (100% identity) | GATC | M.OtsIORF984P |
| 985 | 92 aa hypothetical protein | |||
| 1024 | 248 aa hypothetical protein | |||
| 1025 | M | M.OtsKatoORF781P (43% identity) | GATC | M.OtsIORF1025P |
| 1026 | transposase | |||
| 1029 | transposase | |||
| 1030 | M | N6 adenine-specific DNA-methyltransferase | GATC | M.OtsIORF1030P |
| 1031 | 167 aa hypothetical protein | |||
| 1119 | 182 aa hypothetical protein | |||
| 1120 | M | M.OtsKatoORF781P (100% identity) | GATC | M.OtsIORF1120P |
| 1121 | 92 aa hypothetical protein | |||
| 1205 | 93 aa hypothetical protein | |||
| 1206 | M | M.OtsIORF668P (100% identity) | GATC | M.OtsIORF1206P |
| 1207 | integrase | |||
| 1239 | 93 aa hypothetical protein | |||
| 1240 | M | M.OtsKatoORF1465P (98% identity) | GATC | M.OtsIORF1240P |
| 1241 | 219 aa hypothetical protein | |||
| 1450 | 238 aa hypothetical protein | |||
| ??? | M | DNA methyltransferase | GATC | M.OtsIORFBAP |
| 1451 | M | N6 adenine-specific DNA-methyltransferase | GATC | M.OtsIORFBBP |
| 1452 | 166 aa hypothetical protein | |||
| 1450 | 238 aa hypothetical protein | |||
| ??? | DNA methyltransferase | |||
| 1466 | 167 aa hypothetical protein | |||
| 1467 | M | M.OtsUT76ORF3602P (99% identity) | GATC | M.OtsIORF1467P |
| 1468 | 92 aa hypothetical protein | |||
| 1727 | 242 aa hypothetical protein | |||
| 1728 | M | M.OtsIORF1885P (100% identity) | GATC | M.OtsIORF1728P |
| 1729 | 182 aa hypothetical protein | |||
| 1849 | 255 aa hypothetical protein | |||
| 1850 | M | M.OtsBORF1070P (94% identity) | GATC | M.OtsIORF1850P |
| 1851 | 169 aa hypothetical protein | |||
| 1884 | 93 aa hypothetical protein | |||
| 1885 | M | M.OtsIORF1728P (100% identity) | GATC | M.OtsIORF1885P |
| 1886 | 242 aa hypothetical protein | |||
| 1932 | 242 aa hypothetical protein | |||
| ??? | M | M.OtsKatoORF2055P (99% identity) | GATC | M.OtsIORF1933P |
| 1934 | transposase | |||