Lactobacillus gallinarum HFD4 |
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Putative Lactobacillus gallinarum HFD4 RM systems
Ref: Swarnkar,M.K. et al. unpublished
REBASE ref # 20666
Complete sequence: 2,317,164 bp
GenBank #: CP012890
REBASE acronym: Lga4
Org_num: 17210
All begin AO203_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10840 | 170 aa hypothetical protein | |||
| 10845 | S | S.LcrC037ORFCP (58% identity) | S.Lga4ORF10850P | |
| 10850 | M | M.Lhe8105ORF3945P (64% identity) | M.Lga4ORF10850P | |
| 10855 | 283 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2890 | pseudogene | |||
| 2895 | V | V.Lku186ORF100P (72% identity) | V.Lga4ORF2900P | |
| 2900 | M | M.Lku186ORF100P (81% identity) | GCSGC | M.Lga4ORF2900P |
| 2905 | H | H.Lku186ORF100P (81% identity) | H.Lga4ORF2900P | |
| 2910 | R | Lku186ORF100P (75% identity) | GCSGC | Lga4ORF2900P |
| 2915 | transcriptional regulator | |||
| 8530 | ATPase | |||
| 8535 | RM | Lhe9ORF940P (87% identity) | Lga4ORF8535P | |
| 8540 | 1242 aa hypothetical protein | |||
| 8825 | pseudogene | |||
| 8830 | M | M.Lhe9ORF986P (94% identity) | GATC | M.Lga4ORF8830P |
| 8835 | pseudogene | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2730 | penicillin-binding protein | |||
| 2735 | R | LheLH99ORF78P (98% identity) | Lga4ORF2735P | |
| 2740 | pseudogene | |||