Limnoraphis robusta CS-951 |
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Putative Limnoraphis robusta CS-951 RM systems
Ref: Willis,A. et al. Genome Announc 3 (5), e00846-15 (2015)
REBASE ref # 20489
Contig set: 7,313,383 bp
GenBank #: LATL00000000 (NZ_LATL00000000)
REBASE acronym: Lro951
Org_num: 17107
All begin WN50_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 39490 | adenylate cyclase | |||
| 39495 | S | S.NspHK01ORF38640P (29% identity) | S1.Lro951ORF27365P | |
| 39500 | S | S.Nsp2111ORF28420P (23% identity) | S2.Lro951ORF27365P | |
| 27375 | DNA polymerase subunit beta | |||
| 27370 | 89 aa hypothetical protein | |||
| 27365 | M | M.KspCCNU1ORF35625P (81% identity) | M.Lro951ORF27365P | |
| 39505 | 230 aa hypothetical protein | |||
| 39510 | R | Acy7122ORF585P (54% identity) | Lro951ORF27365P | |
| 27350 | 73 aa hypothetical protein | |||
| 26055 | photosystem I reaction center subunit X | |||
| 26050 | S | S.Mae9443ORF5520036P (87% identity) | S.Lro951ORF26045P | |
| 26045 | M | M.LspP13C2ORF16130P (87% identity) | M.Lro951ORF26045P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 34075 | DNA topoisomerase I | |||
| 34080 | M | M.TspTB121ORFBP (63% identity) | GGWCC | M.Lro951ORF34080P |
| 34085 | preprotein translocase subunit TatC | |||
| 6690 | R | restriction endonuclease HaeII | RGCGCY | Lro951ORF6690P |
| 6695 | glycerol-3-phosphate acyltransferase | |||
| 2705 | M | M.Osp6506ORF3870004P (34% identity) | RCCGGY | M.Lro951ORF2705P |
| 2710 | sulfotransferase | |||
| 34315 | M | M2.Lro951ORF37155P (24% identity) | M.Lro951ORF34315P | |
| ??? | R | Oni7112ORF4716P (50% identity) | Lro951ORF34315P | |
| 34330 | 579 aa hypothetical protein | |||
| 20650 | preprotein translocase subunit TatC | |||
| 20645 | M | M.Lro951ORF34080P (89% identity) | GGWCC | M.Lro951ORF20645P |
| 37940 | DNA topoisomerase I, partial | |||
| 20360 | 581 aa hypothetical protein | |||
| 20355 | M | M.Lsp8106ORF27766P (79% identity) | CGATCG | M.Lro951ORF20355P |
| 20350 | 219 aa hypothetical protein | |||
| 10575 | 602 aa hypothetical protein | |||
| 10570 | M | M.Ssp2018ORF10065P (18% identity) | ACGGC | M.Lro951ORF10570P |
| 10565 | 89 aa hypothetical protein | |||
| 34195 | glycerol-3-phosphate acyltransferase | |||
| ??? | R | hypothetical protein | RGCGCY | Lro951ORF34210P |
| 34210 | M | Lro951ORF13010P (63% identity) | RGCGCY | M.Lro951ORF34210P |
| 34215 | 82 aa hypothetical protein | |||
| 38040 | abortive phage infection protein | |||
| 38045 | C | C.Lsp8106ORF26842P (88% identity) | C.Lro951ORF38055P | |
| 38050 | R | Lsp8106ORF26842P (81% identity) | AGTACT | Lro951ORF38055P |
| 38055 | M | 90 aa hypothetical protein | AGTACT | M1.Lro951ORF38055P |
| 38060 | M | M.Lro951ORF830P (93% identity) | AGTACT | M2.Lro951ORF38055P |
| 38065 | 3-5-bisphosphate nucleotidase | |||
| 15335 | 203 aa hypothetical protein | |||
| 15340 | M | M.Pru82ORF4402P (80% identity) | CMGCKG | M.Lro951ORF31340P |
| 15345 | R | Pru82ORF4402P (82% identity) | CMGCKG | Lro951ORF31340P |
| 15350 | XRE family transcriptional regulator | |||
| 23085 | 733 aa hypothetical protein | |||
| 23080 | R | Tca511288ORF3840P (82% identity) | GGTNACC | Lro951ORF23075P |
| 23075 | M | M.PamM71ORF10465P (77% identity) | GGTNACC | M.Lro951ORF23075P |
| 37830 | pseudogene | |||
| 14580 | twitching motility protein PilT | |||
| 14590 | M | M.Lsp8106ORF13270P (92% identity) | M.Lro951ORF14590P | |
| 14595 | 235 aa hypothetical protein | |||
| 36655 | 133 aa hypothetical protein | |||
| ??? | M | M.Lro951ORF36955P (89% identity) | GGYRCC | M.Lro951ORF36660P |
| 36670 | stationary phase survival protein SurE | |||
| 37150 | 644 aa hypothetical protein | |||
| 37155 | M | M2.Lro951ORF37155P (76% identity) | M1.Lro951ORF37155P | |
| 37160 | 113 aa hypothetical protein | |||
| 37165 | M | M.Lsp8106ORF4771P (89% identity) | M2.Lro951ORF37155P | |
| 33495 | pseudogene | |||
| 2295 | R | NspMS1ORF58690P (78% identity) | TCCGGA | Lro951ORF2300P |
| 2300 | M | M.PagC7805ORF2870P (82% identity) | TCCGGA | M.Lro951ORF2300P |
| 2305 | poly(A) polymerase | |||
| 25535 | 89 aa hypothetical protein | |||
| ??? | M | M.Lsp8106ORF19883P (57% identity) | M.Lro951ORF33995P | |
| 34005 | N-acetylmuramic acid 6-phosphate etherase | |||
| 1200 | lipid-A-disaccharide synthase | |||
| 1205 | RM | Mvi102ORF42670P (62% identity) | Lro951ORF1205P | |
| 1210 | 130 aa hypothetical protein | |||
| 415 | 78 aa hypothetical protein | |||
| ??? | M | M.Lma14464ORFAP (41% identity) | M.Lro951ORF35980P | |
| 35990 | 169 aa hypothetical protein | |||
| 37075 | 89 aa hypothetical protein | |||
| 37080 | M | M.Ssp2018ORF10065P (18% identity) | ACGGC | M.Lro951ORF10570P |
| 37085 | 556 aa hypothetical protein | |||
| 36950 | 1488 aa hypothetical protein | |||
| 36955 | M | M.Lsp8106ORF1242P (81% identity) | GGYRCC | M.Lro951ORF36955P |
| 25280 | stationary phase survival protein SurE | |||
| 31335 | 203 aa hypothetical protein | |||
| 31340 | M | M.Pru82ORF4402P (80% identity) | CMGCKG | M.Lro951ORF31340P |
| 31345 | R | Pru82ORF4402P (82% identity) | CMGCKG | Lro951ORF31340P |
| 31350 | XRE family transcriptional regulator | |||
| 27875 | 80 aa hypothetical protein | |||
| 27870 | RM | Lsp8106ORF29195P (91% identity) | Lro951ORF27870P | |
| 27865 | 78 aa hypothetical protein | |||
| 14245 | fumarate reductase | |||
| 14250 | M | M.PagC7805ORF1879P (72% identity) | GGATCC | M1.Lro951ORF14250P |
| 38520 | R | R2.Lro951ORF14250P (100% identity) | GGATCC | R1.Lro951ORF14250P |
| 38525 | M | M1.Lro951ORF14250P (56% identity) | GGATCC | M2.Lro951ORF14250P |
| 38530 | R | R1.Lro951ORF14250P (100% identity) | GGATCC | R2.Lro951ORF14250P |
| 25445 | pentapeptide repeat protein | |||
| 32110 | RM | Nsp0039ORF3001AP (86% identity) | Lro951ORF32110AP | |
| 25435 | 74 aa hypothetical protein | |||
| 25430 | CopG family transcriptional regulator | |||
| 25425 | 75 aa hypothetical protein | |||
| 25420 | 103 aa hypothetical protein | |||
| 32115 | RM | Pru82ORF1195P (30% identity) | Lro951ORF32110BP | |
| 25410 | 173 aa hypothetical protein | |||
| 29840 | 3-dehydroquinate synthase | |||
| 29835 | M | M.Afl2012ORF3700P (51% identity) | CCRYGG | M.Lro951ORF29835P |
| 29830 | R | Dsa8305ORF1067P (54% identity) | CCRYGG | Lro951ORF29835P |
| 29825 | 147 aa hypothetical protein | |||
| 13015 | Pyrroline-5-carboxylate reductase | |||
| ??? | R | M.Lro951ORF34210P (63% identity) | RGCGCY | Lro951ORF13010P |
| 9635 | transketolase | |||
| 39625 | RM | Dco806ORF46670P (68% identity) | Lro951ORF39625P | |
| 580 | universal stress family protein | |||
| 37215 | 363 aa hypothetical protein | |||
| 9260 | M | M.Lsp8106ORF1242P (81% identity) | GGYRCC | M.Lro951ORF36955P |
| 9265 | 1488 aa hypothetical protein | |||
| 23825 | 259 aa hypothetical protein | |||
| 23820 | M | M.NpuORF6310P (61% identity) | GRCGYC | M.Lro951ORF23820P |
| 23815 | cobalt-precorrin-8X methylmutase | |||
| 815 | abortive phage infection protein | |||
| 820 | C | C.Lsp8106ORF26842P (88% identity) | C.Lro951ORF38055P | |
| 825 | R | Lsp8106ORF26842P (81% identity) | AGTACT | Lro951ORF38055P |
| 830 | modification methylase | |||
| 825 | 183 aa hypothetical protein | |||
| 830 | M | M2.Lro951ORF38055P (93% identity) | AGTACT | M.Lro951ORF830P |
| 835 | 3-5-bisphosphate nucleotidase | |||