Riemerella anatipestifer RA-JLLY |
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Putative Riemerella anatipestifer RA-JLLY RM systems
Ref: Zhang,T. et al. Genome Announc 3 (5), e00895-15 (2015)
REBASE ref # 20426
Contig set: 2,187,967 bp
GenBank #: LAVB00000000 (NZ_LAVB00000000)
REBASE acronym: RanJLLY
Org_num: 17080
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 305 | 68 aa hypothetical protein | |||
| 306 | M | M.RanS63ORF8150P (98% identity) | M.RanJLLYORFAP | |
| 308 | S | S.RanS63ORF8150P (98% identity) | S.RanJLLYORFAP | |
| 309 | 158 aa hypothetical protein | |||
| 310 | damage-inducible protein D | |||
| 311 | R | RanHXbORF1650P (99% identity) | RanJLLYORFAP | |
| 312 | endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1 | RM | TspS323ORF15125P (46% identity) | RanJLLYORFEP | |
| 2 | 232 aa hypothetical protein | |||
| 218 | adenine deaminase | |||
| 219 | R | PbaD1VP (74% identity) | ATTAAT | RanJLLYORFCP |
| 220 | M | M.Hsp5317J9ORF8885P (60% identity) | ATTAAT | M.RanJLLYORFCP |
| 222 | 166 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 105 | NAD-dependent DNA ligase LigA | |||
| 106 | R | Mod63039ORF12175P (70% identity) | RanJLLYORFBP | |
| 109 | ATPase | |||
| 110 | M | M.Tpu846ORF5790P (54% identity) | M.RanJLLYORFBP | |
| 112 | 66 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 40 | lysyl-tRNA synthetase | |||
| 42 | R | RanHXbMcrBP (99% identity) | RanJLLYMcrBP | |
| 43 | R | Ran416McrCP (100% identity) | RanJLLYMcrCP | |
| 44 | 64 aa hypothetical protein | |||