Haemophilus influenzae HI1988 |
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Putative Haemophilus influenzae HI1988 RM systems
Ref: VanWagoner,T.M. et al. Genome Announc 3 (5), e00899-15 (2015)
REBASE ref # 20425
Contig set: 1,844,600 bp
GenBank #: LFFN00000000 (NZ_LFFN00000000)
REBASE acronym: Hin1988
Org_num: 17117
All begin ABN83_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 45 | signal recognition particle | |||
| 50 | R | HinR535ORF4005P (100% identity) | Hin1988ORF65P | |
| ??? | S | S.HinEEORF2765P (100% identity) | S.Hin1988ORF65P | |
| 60 | ATPase | |||
| 65 | M | M.HinR535ORF4005P (100% identity) | M.Hin1988ORF65P | |
| 70 | metal-binding protein | |||
| 7885 | oligopeptidase A | |||
| 7890 | M | M.Hin8883ORF2205P (100% identity) | M.Hin1988ORF7890P | |
| 7895 | S | S.HinIII1ORF8070P (67% identity) | S.Hin1988ORF7890P | |
| 7900 | anticodon nuclease | |||
| 7905 | 2-hydroxyacid dehydrogenase | |||
| 7910 | R | HinIII4ORF8150P (100% identity) | Hin1988ORF7890P | |
| 7915 | membrane protein | |||
| 1410 | translation initiation factor IF-2 | |||
| 1415 | R | HinR535ORF90P (100% identity) | Hin1988ORF1430P | |
| 1420 | 345 aa hypothetical protein | |||
| 1425 | S | S.HinR535ORF90P (99% identity) | S.Hin1988ORF1430P | |
| 1430 | M | M.HinIII1ORF11640P (100% identity) | M.Hin1988ORF1430P | |
| 1435 | ribosome-binding factor A | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8320 | 3-phosphoshikimate 1-carboxyvinyltransferase | |||
| 8325 | M | M.HinIII5ORF14360P (100% identity) | CGCG | M.Hin1988ORF8325P |
| 8330 | R | HinR2846ORFAP (100% identity) | CGCG | Hin1988ORF8325P |
| 8335 | recombination factor protein RarA | |||
| 6080 | 23S rRNA methyltransferase | |||
| ??? | M | M.Hin8881ORF3485P (100% identity) | M.Hin1988ORF6085P | |
| 6090 | histidine kinase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4095 | 113 aa hypothetical protein | |||
| 4100 | R | HinIII5ORF16620P (99% identity) | CGAG | Hin1988ORF4105P |
| ??? | M | M.Hin2004ORF4795P (99% identity) | CGAG | M.Hin1988ORF4105P |
| 4120 | ribonuclease HII | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7850 | 3-dehydroquinate synthase | |||
| 7855 | M | M.HinR535ORF3185P (100% identity) | GATC | M.Hin1988ORF7855P |
| 7860 | 115 aa hypothetical protein | |||