Haemophilus influenzae HI1980 |
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Putative Haemophilus influenzae HI1980 RM systems
Ref: VanWagoner,T.M. et al. Genome Announc 3 (5), e00899-15 (2015)
REBASE ref # 20425
Contig set: 1,761,053 bp
GenBank #: LFFO00000000 (NZ_LFFO00000000)
REBASE acronym: Hin1980
Org_num: 17160
All begin ABN79_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 15 | membrane protein | |||
| 20 | R | HinNTHORFRP (100% identity) | Hin1980ORF40P | |
| 25 | 2-hydroxyacid dehydrogenase | |||
| 30 | anticodon nuclease | |||
| 35 | S | S.Hin2791ORF4455P (100% identity) | S.Hin1980ORF40P | |
| 40 | M | M.Hin9224ORF4405P (100% identity) | M.Hin1980ORF40P | |
| 45 | oligopeptidase A | |||
| 1120 | metal-binding protein | |||
| 1125 | M | M.HinII4ORF8830P (100% identity) | M.Hin1980ORF1125P | |
| 1130 | ATPase | |||
| 1135 | S | S.HinP3EMOORF6585P (100% identity) | S.Hin1980ORF1125P | |
| 1140 | R | HinB231ORFGP (100% identity) | Hin1980ORF1125P | |
| 1145 | signal recognition particle | |||
| 5250 | ribosome-binding factor A | |||
| 5255 | M | M.Hin1394ORFAP (100% identity) | M.Hin1980ORF5255P | |
| 5260 | S | S.HinB231ORFEP (100% identity) | S.Hin1980ORF5255P | |
| 5265 | 129 aa hypothetical protein | |||
| 5270 | R | Hin1394ORFAP (100% identity) | Hin1980ORF5255P | |
| 5275 | translation initiation factor IF-2 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4070 | recombination factor protein RarA | |||
| 4075 | R | HinII8ORF15700P (100% identity) | CGCG | Hin1980ORF4080P |
| 4080 | M | M.HinR535ORF5230P (100% identity) | CGCG | M.Hin1980ORF4080P |
| 4085 | 3-phosphoshikimate 1-carboxyvinyltransferase | |||
| 4915 | valyl-tRNA synthetase | |||
| 4920 | R | HinIII8ORF12360P (100% identity) | AAGCTT | Hin1980ORF4925P |
| 4925 | M | M.HinIII8ORF12360P (100% identity) | AAGCTT | M.Hin1980ORF4925P |
| 4930 | valine--tRNA ligase | |||
| 5030 | condesin subunit E | |||
| 5035 | R | HinP3EMOORF3885P (100% identity) | RGCGCY | Hin1980ORF5040P |
| 5040 | M | M.HinKR271ORF1213P (100% identity) | RGCGCY | M.Hin1980ORF5040P |
| 5045 | condesin subunit F | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7305 | ribonuclease HII | |||
| 7310 | M | M.HinIII3ORF16370P (100% identity) | M.Hin1980ORF7310P | |
| 7315 | R | HinIII3ORF16370P (100% identity) | Hin1980ORF7310P | |
| 7320 | 113 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 65 | phosphatidylglycerophosphatase | |||
| 70 | M | M.HinP3EMOORF7155P (100% identity) | GATC | M.Hin1980ORF70P |
| 75 | 3-dehydroquinate synthase | |||