Haemophilus influenzae HI1974 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Haemophilus influenzae HI1974 RM systems
Ref: VanWagoner,T.M. et al. Genome Announc 3 (5), e00899-15 (2015)
REBASE ref # 20425
Contig set: 1,774,730 bp
GenBank #: LFFT00000000 (NZ_LFFT00000000)
REBASE acronym: Hin1974
Org_num: 17164
All begin ABN63_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 15 | membrane protein | |||
| 20 | R | HinNTHORFRP (100% identity) | TTTANNNNNNNGTT | Hin1974ORF40P |
| 25 | 2-hydroxyacid dehydrogenase | |||
| 30 | anticodon nuclease | |||
| 35 | S | S.HinKR271ORF774P (100% identity) | TTTANNNNNNNGTT | S.Hin1974ORF40P |
| 40 | M | M.HinKR271ORF774P (100% identity) | TTTANNNNNNNGTT | M.Hin1974ORF40P |
| 45 | oligopeptidase A | |||
| 6875 | ribosome-binding factor A | |||
| 6880 | M | M.Hin375IV (100% identity) | M.Hin1974ORFAP | |
| 6885 | S | S.HinKR271ORF1170P (100% identity) | S.Hin1974ORFAP | |
| 6890 | 348 aa hypothetical protein | |||
| 6895 | R | HinKR271ORF1170P (100% identity) | Hin1974ORFAP | |
| 6900 | translation initiation factor IF-2 | |||
| 3705 | metal-binding protein | |||
| 3710 | M | M.HinKR271ORF879P (100% identity) | M.Hin1974ORF3710P | |
| 3715 | ATPase | |||
| 3720 | S | S.HinP3EMOORF6585P (100% identity) | S.Hin1974ORF3710P | |
| 3725 | R | HinKR271ORF879P (100% identity) | Hin1974ORF3710P | |
| 3730 | signal recognition particle | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5540 | condesin subunit E | |||
| 5545 | R | HinP3EMOORF3885P (100% identity) | RGCGCY | Hin1974ORF5550P |
| 5550 | M | M.HinKR271ORF1213P (100% identity) | RGCGCY | M.Hin1974ORF5550P |
| 5555 | condesin subunit F | |||
| 6090 | 3-phosphoshikimate 1-carboxyvinyltransferase | |||
| 6095 | M | M.HinII5ORF14390P (100% identity) | CGCG | M.Hin1974ORF6095P |
| 6100 | R | HinR535ORF5230P (100% identity) | CGCG | Hin1974ORF6095P |
| 6105 | recombination factor protein RarA | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1600 | 163 aa hypothetical protein | |||
| 1605 | M | M.HinKR271ORF1640P (79% identity) | M.Hin1974ORF1605P | |
| 1610 | R | HinKR271ORF1640P (100% identity) | Hin1974ORF1605P | |
| 1615 | 113 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 65 | phosphatidylglycerophosphatase | |||
| 70 | M | M.HinP3EMOORF7155P (100% identity) | GATC | M.Hin1974ORF70P |
| 75 | 3-dehydroquinate synthase | |||