Endosymbiont bacterium Bathymodiolus septemdierum Myojin knoll |
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Putative Endosymbiont bacterium Bathymodiolus septemdierum Myojin knoll RM systems
Ref: Fujiwara,Y. et al. Mar. Ecol. Prog. Ser. 208, 147-155 (2000)
REBASE ref # 20560
Complete sequence: 1,469,434 bp
GenBank #: AP013042
REBASE acronym: EbaMk
Org_num: 17011
All begin BSEPE_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 658 | aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) | |||
| 659 | M | M.Sba2023ORF1670P (57% identity) | M.EbaMkORF659P | |
| 660 | DNA-damage-inducible protein D | |||
| ??? | S | S.Ast1078ORFAP (25% identity) | S.EbaMkORF659P | |
| 663 | 522 aa conserved hypothetical protein | |||
| 782 | 245 aa hypothetical protein | |||
| 783 | S | S.Ama15502ORF2103P (45% identity) | S.EbaMkORF784P | |
| 784 | M | M.Ama15502ORF2103P (79% identity) | M.EbaMkORF784P | |
| 785 | Fic family protein | |||
| 1188 | NADH dehydrogenase/NAD(P)H nitroreductase RutE | |||
| 1189 | R | CspPY97NORF325P (83% identity) | EbaMkORF1193P | |
| 1190 | S | S1.MmaMR1ORF62P (64% identity) | S.EbaMkORF1193P | |
| 1191 | pseudogene | |||
| 1192 | 340 aa conserved hypothetical protein | |||
| 1193 | M | M.MmaMR1ORF62P (82% identity) | M.EbaMkORF1193P | |
| 1194 | 72 aa conserved hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 103 | 438 aa conserved hypothetical protein | |||
| 104 | M | M.Bth9NORF2078P (73% identity) | GTCGAC | M.EbaMkORF104P |
| 105 | 308 aa conserved hypothetical protein | |||
| 139 | O-succinylhomoserine sulfhydrylase | |||
| 140 | R | Sme576ORF2393P (17% identity) | AGCT | EbaMkORF141P |
| 141 | M | M.BthBATORF14235P (27% identity) | AGCT | M.EbaMkORF141P |
| 142 | amidophosphoribosyltransferase | |||
| 250 | succinyl-CoA synthetase beta subunit | |||
| 251 | R | Abas868ORF3860P (50% identity) | GCNGC | EbaMkORF252P |
| 252 | M | M.SbaTM7iORF2915P (34% identity) | GCNGC | M.EbaMkORF252P |
| 253 | elongation factor P | |||
| 859 | 110 aa hypothetical protein | |||
| 860 | M | M.CstHL69ORFRP (69% identity) | GGYRCC | M.EbaMkORF860P |
| 861 | R | CstHL69ORFRP (72% identity) | GGYRCC | EbaMkORF860P |
| 862 | NAD+ synthase (glutamine-hydrolysing) | |||
| 1404 | IS256 family transposase | |||
| 1405 | M | M2.Isp9ORF1110P (41% identity) | CCTTC | M.EbaMkORF1405P |
| 1406 | R | HpyZ007XIP (36% identity) | CCTTC | EbaMkORF1405P |
| 1407 | XRE family transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 559 | 152 aa conserved hypothetical protein | |||
| 560 | M | M.Bth9NORF1433P (55% identity) | M.EbaMkORF560P | |
| 561 | R | BthBATORF10000P (78% identity) | EbaMkORF560P | |
| 562 | tRNA-dihydrouridine synthase A | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 112 | 149 aa hypothetical protein | |||
| 113 | R | Bth9NMcrBP (27% identity) | EbaMkMcrBP | |
| 114 | R | TaeAL3McrCP (45% identity) | EbaMkMcrCP | |
| 115 | 77 aa conserved hypothetical protein | |||