Salmonella enterica subsp. enterica serovar Thompson RM1984 |
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Putative Salmonella enterica subsp. enterica serovar Thompson RM1984 RM systems
Ref: Parker,C.T. et al. unpublished
REBASE ref # 20935
Complete sequence: 4,708,710 bp
GenBank #: CP012513
REBASE acronym: Sen1984
Org_num: 17040
All begin STho1984_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4448 | endoribonuclease SymE | |||
| 4449 | S | S.Spy5740I (100% identity) | AGANNNNNNNNCTGG | S.Sen1984ORF4450P |
| 4450 | M | M.Spy5740I (100% identity) | AGANNNNNNNNCTGG | M.Sen1984ORF4450P |
| 4451 | R | Spy5740IP (100% identity) | AGANNNNNNNNCTGG | Sen1984ORF4450P |
| 4452 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1998 | amino acid exporter | |||
| 1999 | V | V.StyUK1DcmP (100% identity) | V.Sen1984DcmP | |
| 2000 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.Sen1984DcmP |
| 2001 | hydrolase | |||
| 3303 | DNA-binding protein Fis | |||
| 3304 | M | M.SenThORF2290P (100% identity) | ATGCAT | M.Sen1984ORF3304P |
| 3305 | periplasmic protein | |||
| 3400 | ribulose-phosphate 3-epimerase | |||
| 3401 | M | DNA adenine methylase | GATC | M.Sen1984DamP |
| 3402 | membrane protein | |||
| 4417 | 81 aa hypothetical protein | |||
| 4418 | M | M.Spy5740IV (100% identity) | GGTACC | M.Sen1984ORF4418P |
| 4419 | R | Spy5740IVP (100% identity) | GGTACC | Sen1984ORF4418P |
| 4420 | 239 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 391 | sugar transporter | |||
| 392 | M | M.Spy5740II (100% identity) | CAGAG | M.Sen1984ORF392P |
| ??? | R | Ssp15303ORFGP (99% identity) | CAGAG | Sen1984ORF392P |
| 394 | 33 aa hypothetical protein | |||