Confluentimicrobium species EMB200-NS6 |
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Putative Confluentimicrobium species EMB200-NS6 RM systems
Ref: Jin,H.M. et al. unpublished
REBASE ref # 20581
| Sequence length: | GenBank #: | |
| Chromosome: | 3,649,316 bp | CP010869 |
| plasmid pNS6001: | 184,737 bp | CP010870 |
| plasmid pNS6002: | 157,294 bp | CP010871 |
| plasmid pNS6003: | 156,079 bp | CP010872 |
REBASE acronym: CspNS6
Org_num: 17016
All begin TQ29_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7165 | CopG family transcriptional regulator | |||
| 7170 | S | S2.Psp80058ORF18305P (64% identity) | S1.CspNS6ORF7175P | |
| 7175 | M | M.CspNS6ORF17760P (97% identity) | M.CspNS6ORF7175P | |
| 7180 | S | S2.CspNS6ORF17760P (66% identity) | S2.CspNS6ORF7175P | |
| 7185 | 76 aa hypothetical protein | |||
| 7190 | phosphoserine phosphatase | |||
| 7195 | R | PdeOD1ORFCP (95% identity) | CspNS6ORF7175P | |
| 7200 | 102 aa hypothetical protein | |||
| 14470 | 65 aa hypothetical protein | |||
| 14475 | M | M.TmoA3R06ORF18785P (96% identity) | CRAANNNNNNNGTCY | M.CspNS6III |
| 14480 | S | S.AspM344ORF7265P (58% identity) | CRAANNNNNNNGTCY | S.CspNS6III |
| 14485 | R | TmoA3R06ORF18785P (93% identity) | CRAANNNNNNNGTCY | CspNS6IIIP |
| 14490 | thymidylate synthase | |||
| plasmid pNS6001 | ||||
| 17750 | conjugal transfer protein TrbL | |||
| 17755 | S | S1.AcrS202ORF10820P (95% identity) | S1.CspNS6ORF17760P | |
| 17760 | M | M.CspNS6ORF7175P (97% identity) | M.CspNS6ORF17760P | |
| 17765 | S | S2.AcrS202ORF10820P (57% identity) | S2.CspNS6ORF17760P | |
| 17770 | sporadically distributed protein, TIGR04141 | |||
| 17775 | R | AcrS202ORF10820P (95% identity) | CspNS6ORF17760P | |
| 17780 | 238 aa hypothetical protein | |||
| plasmid pNS6003 | ||||
| 19590 | 59 aa hypothetical protein | |||
| 19595 | M | M.NrhOXR85ORF20625P (94% identity) | GACNNNNNNNGTC | M.CspNS6IV |
| 19600 | S | S.Tni11ORF19700P (59% identity) | GACNNNNNNNGTC | S.CspNS6IV |
| 19605 | DNA-binding protein | |||
| 19610 | 82 aa hypothetical protein | |||
| 19615 | R | Tni11ORF19700P (95% identity) | GACNNNNNNNGTC | CspNS6IVP |
| 19620 | polymerase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12240 | transposase | |||
| 12245 | M | M1.Xtr843ORF14900P (47% identity) | GGCGGA | M1.CspNS6II |
| ??? | M | M1.RspNI22ORFAP (43% identity) | GGCGGA | M2.CspNS6IIP |
| 12255 | mechanosensitive ion channel protein MscS | |||
| 17075 | 255 aa hypothetical protein | |||
| 17080 | M | M.RspNI22ORF2670P (99% identity) | GANTC | M.CspNS6I |
| 17085 | ribonuclease HII | |||
| plasmid pNS6002 | ||||
| 19045 | plasmid stabilization protein | |||
| 19050 | RM | MblMV1ORF12015P (79% identity) | CspNS6ORF19050P | |
| 19055 | 294 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7300 | transposase | |||
| 7305 | R | CinP73McrC3P (49% identity) | CspNS6McrC2AP | |
| 7310 | 256 aa hypothetical protein U879_09245 | |||
| 7315 | transposase | |||
| 7320 | R | Psp4604McrCP (40% identity) | CspNS6McrC2BP | |
| 7325 | R | RsaMcrBP (65% identity) | CspNS6McrB2P | |
| 7330 | 430 aa hypothetical protein | |||
| 16585 | antirepressor | |||
| 16590 | R | RspA2McrCP (62% identity) | CspNS6McrCP | |
| 16605 | pseudogene | |||