Salmonella enterica subsp. enterica serovar Typhi PM016/13 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Typhi PM016/13 RM systems
Ref: Ismail,A. et al. unpublished
REBASE ref # 20980
Complete sequence: 4,793,553 bp
GenBank #: CP012091
REBASE acronym: Sen16
Org_num: 17036
All begin ACT03_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 18655 | endoribonuclease SymE | |||
| 18660 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.Sen16ORF18665P |
| 18665 | M | M.StyTORF4575P (88% identity) | GAANNNNNNNNTCGC | M.Sen16ORF18665P |
| 18670 | R | StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | Sen16ORF18665P |
| 18675 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5185 | 190 aa hypothetical protein | |||
| 5190 | M | M.StyTORF1914P (100% identity) | M.Sen16ORF5190P | |
| 5195 | bacteriophage protein | |||
| 5250 | DGQHR domain protein | |||
| 5255 | M | M.StyTORF1926P (100% identity) | GATC | M.Sen16ORF5255P |
| 5260 | 79 aa hypothetical protein | |||
| 12150 | Fis family transcriptional regulator | |||
| 12155 | M | methyltransferase | ATGCAT | M.Sen16I |
| 12160 | membrane protein | |||
| 12630 | ribulose-phosphate 3-epimerase | |||
| 12635 | M | DNA adenine methylase | GATC | M.Sen16DamP |
| 12640 | cell division protein DamX | |||
| 15765 | endonuclease | |||
| 15770 | M | M.StyTORF3409P (100% identity) | GATC | M.Sen16ORF15770P |
| 15775 | 75 aa hypothetical protein | |||
| 17425 | endonuclease | |||
| 17430 | M | M.StyTORF4329P (100% identity) | GATC | M.Sen16ORF17430P |
| 17435 | 3-5 exonuclease | |||
| 23645 | hydrolase | |||
| 5 | M | M.Pga22758DcmP (61% identity) | CCWGG | M.Sen16DcmP |
| 10 | V | V.StyTDcmP (100% identity) | V.Sen16DcmP | |
| 15 | multidrug DMT transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8170 | 33 aa hypothetical protein | |||
| 8175 | R | StyTORF2507P (99% identity) | CAGAG | Sen16IIP |
| 8180 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen16II |
| 8185 | sugar transporter | |||
| 23575 | type IV pilin | |||
| 23580 | R | SenUJ816AORFEP (100% identity) | CCGAG | Sen16IIIP |
| 23585 | M | M.SenUJ816AORFEP (100% identity) | CCGAG | M.Sen16III |
| 23590 | SpnT protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18670 | DEAD/DEAH box helicase | |||
| 18675 | R | StyTMrrP (100% identity) | Sen16MrrP | |
| 18680 | membrane protein | |||