Thermodesulfovibrio yellowstonii DSM 11347 |
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Putative Thermodesulfovibrio yellowstonii DSM 11347 RM systems
Ref: Dodson,R.J. et al. unpublished
REBASE ref # 10577
Complete sequence: 2,003,803 bp
GenBank #: CP001147 (NC_011296)
REBASE acronym: Tye11347
Org_num: 5044
All begin THEYE_A
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1688 | pyridine nucleotide-disulfide oxidoreductase | |||
| 1689 | M | M.Aba761ORF2312P (83% identity) | M.Tye11347ORF1689P | |
| 1690 | nucleotidyltransferase | |||
| 1691 | hepn domain, putative | |||
| 1693 | S | S.SspADCORF14200P (30% identity) | S.Tye11347ORF1689P | |
| 1694 | ATPase involved in DNA repair, putative | |||
| 1695 | 254 aa hypothetical protein | |||
| 1696 | 157 aa hypothetical protein | |||
| 1697 | R | PbaBD1IIP (65% identity) | Tye11347ORF1689P | |
| 1698 | iron-sulfur cluster-binding protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 377 | 303 aa conserved hypothetical protein | |||
| 378 | M | M.UbaMDORFN6P (41% identity) | M1.Tye11347ORF378P | |
| 379 | R | type II restriction enzyme | Tye11347ORF378P | |
| 380 | M | M2.UbaMDORFI8P (58% identity) | M2.Tye11347ORF378P | |
| 381 | DNA repair protein | |||
| 448 | NAD+ synthetase | |||
| 449 | M | M.Nba55ORF5010P (66% identity) | GGNCC | M.Tye11347ORF449P |
| 450 | R | Nba55ORF5010P (67% identity) | GGNCC | Tye11347ORF449P |
| 451 | DNA methylase | |||
| 450 | type II restriction endonuclease TdeIII | |||
| 451 | M | M.MspLAm1ORF2790P (70% identity) | GGCC | M.Tye11347ORF451P |
| 452 | R | MspLAm1ORF2790P (54% identity) | GGCC | Tye11347ORF451P |
| 453 | 88 aa hypothetical protein | |||
| 514 | protein | |||
| 515 | R | EsaDix6IP (68% identity) | TCGA | Tye11347ORF516P |
| 516 | M | modification methylase TaqI | TCGA | M.Tye11347ORF516P |
| 517 | type II restriction enzyme MjaI | |||
| 516 | modification methylase TaqI | |||
| 517 | R | UprJFFORF21P (71% identity) | CTAG | Tye11347ORF518P |
| 518 | M | M.UprJFFORF21P (78% identity) | CTAG | M.Tye11347ORF518P |
| 519 | 585 aa hypothetical protein | |||
| 734 | FrgC | |||
| 735 | M | M.Nba55ORF7820P (50% identity) | M.Tye11347ORF735P | |
| 736 | R | UbaMDORFW6P (67% identity) | CCGG | Tye11347ORF735P |
| 737 | 137 aa conserved hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1188 | 68 aa conserved hypothetical protein | |||
| 1189 | M | M.Cbo2020ORF33270P (51% identity) | M.Tye11347ORF1189P | |
| 1190 | R | Cbo2020ORF33270P (65% identity) | Tye11347ORF1189P | |
| 1191 | pseudogene | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1963 | conserved domain protein | |||
| 1964 | R | Ava23Mrr2P (45% identity) | Tye11347MrrP | |
| 1965 | probable endonuclease IV, putative | |||