Bifidobacterium bifidum BF3 |
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Putative Bifidobacterium bifidum BF3 RM systems
Ref: Kim,J.F. and Kwak,M.-J. unpublished
REBASE ref # 20395
Complete sequence: 2,210,370 bp
GenBank #: CP010412
REBASE acronym: BbiBF3
Org_num: 16959
All begin RY70_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 178 | 65 aa Hypothetical protein | |||
| 179 | R | Bbi29521ORF127P (100% identity) | GRCGYC | BbiBF3ORF180P |
| ??? | M | M.BbiBGN4ORF114P (100% identity) | GRCGYC | M.BbiBF3ORF180P |
| 181 | integral membrane protein | |||
| 234 | Beta-galactosidase | |||
| ??? | R | BbiBGN4ORF161P (100% identity) | GGCGCC | BbiBF3ORF235P |
| 236 | DNA-binding protein | |||
| 382 | DNA-damage-inducible protein J | |||
| 383 | M | M.Bfi002ORF5155P (100% identity) | TCCGGA | M.BbiBF3ORF383P |
| ??? | R | Bfi002ORF5155P (99% identity) | TCCGGA | BbiBF3ORF383P |
| 385 | 107 aa Hypothetical protein | |||
| 625 | 40 aa Hypothetical protein | |||
| 626 | R | Bbi8628BORF529P (99% identity) | BbiBF3ORF626P | |
| 627 | GTPase HflX | |||
| 786 | tyrosine recombinase | |||
| ??? | M | M.BbiBGN4ORF672P (100% identity) | CTCGAG | M.BbiBF3ORF787P |
| ??? | R | PmeBin303ORFDP (100% identity) | CTCGAG | BbiBF3ORF787P |
| 789 | 290 aa Hypothetical protein | |||
| 899 | Transposase subunit B | |||
| ??? | M | M.PmeBin303ORFAP (100% identity) | GAATTC | M.BbiBF3ORFAP |
| 902 | 84 aa Hypothetical protein | |||
| 974 | 1217 aa Hypothetical protein | |||
| 975 | RM | BbiS6ORF6190P (84% identity) | BbiBF3ORF975P | |
| 976 | SIR2 2 domain containing protein | |||
| 1352 | 160 aa Hypothetical protein | |||
| 1353 | M | M.Bfi002ORF415P (99% identity) | M.BbiBF3ORF1353P | |
| 1354 | 466 aa Hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 980 | 385 aa Hypothetical protein | |||
| 981 | R | BbiDMrrP (99% identity) | BbiBF3MrrP | |
| 982 | Gp2 phage-like protein | |||