Pectobacterium carotovorum subsp. carotovorum ICMP 5702 |
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Putative Pectobacterium carotovorum subsp. carotovorum ICMP 5702 RM systems
Ref: Panda,P. et al. Genome Announc 3 (4), e00875-15 (2015)
REBASE ref # 20279
Contig set: 4,774,457 bp
GenBank #: AODT00000000 (NZ_AODT00000000)
REBASE acronym: Pca5702
Org_num: 16863
All begin G032_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2080 | integrase | |||
| 2085 | R | BspIr50ORF21495P (98% identity) | Pca5702ORF2105P | |
| 2090 | S | S.Kva71ORFDP (52% identity) | S.Pca5702ORF2105P | |
| 2095 | chromosome segregation protein SMC | |||
| 2100 | 267 aa hypothetical protein | |||
| 2105 | M | M.PspF11ORF3016P (97% identity) | M.Pca5702ORF2105P | |
| 2110 | pseudogene | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4570 | M | M.SspFB5ORF46210P (82% identity) | GAATTC | M.Pca5702ORF4570P |
| 4575 | R | SspFB5ORF46210P (79% identity) | Pca5702ORF4570P | |
| 4580 | plasmid maintenance protein CcdB | |||
| 18765 | ribulose-phosphate 3-epimerase | |||
| 18770 | M | M.PcaZM1DamP (100% identity) | GATC | M.Pca5702DamP |
| 18775 | 338 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2245 | 111 aa hypothetical protein | |||
| 2250 | R | PcaBC1McrBP (86% identity) | Pca5702McrBP | |
| 2255 | R | PcaWPP14McrCP (98% identity) | Pca5702McrCP | |
| 2260 | transcriptional regulator | |||