Escherichia coli SF-173 |
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Putative Escherichia coli SF-173 RM systems
Ref: Stephens,C.M. et al. unpublished
REBASE ref # 21004
| Sequence length: | GenBank #: | |
| Chromosome: | 5,059,732 bp | CP012631 |
| plasmid pSF-173-1: | 93,074 bp | CP012632 |
REBASE acronym: EcoSF173
Org_num: 16840
All begin AN205_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21005 | restriction endonuclease | |||
| 21010 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | EcoSF173ORF21015P |
| 21015 | M | M.Ecoppa1ORF6185P (100% identity) | CCANNNNNNNCTTC | M.EcoSF173ORF21015P |
| 21020 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.EcoSF173ORF21015P |
| 21025 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1775 | cell division protein DamX | |||
| 1780 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoSF173DamP |
| 1785 | ribulose phosphate epimerase | |||
| 2390 | 59 aa hypothetical protein | |||
| 2395 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoSF173ORF2395P |
| 2400 | Fis family transcriptional regulator | |||
| 5775 | 162 aa hypothetical protein | |||
| 5780 | M | M.EcoY26ORF4515P (100% identity) | GATC | M.EcoSF173ORF5780P |
| 5785 | LexA family transcriptional regulator | |||
| 9885 | hydrolase | |||
| 9890 | M | M.EcoXMDcmP (100% identity) | CCWGG | M.EcoSF173DcmP |
| 9895 | V | V.SflC32DcmP (74% identity) | V.EcoSF173DcmP | |
| 9900 | multidrug DMT transporter | |||
| 13350 | 75 aa hypothetical protein | |||
| 13370 | M | M.SboBSORF1444P (100% identity) | A | M.EcoSF173ORF13370P |
| 13375 | TrmB family transcriptional regulator | |||
| 16585 | endonuclease | |||
| ??? | M | M.EcoS1283ORF6210P (100% identity) | GATC | M.EcoSF173ORF16590P |
| 16595 | 100 aa hypothetical protein | |||
| 21595 | 118 aa hypothetical protein | |||
| 21600 | M | M.EcosS3ORF15775P (100% identity) | M.EcoSF173ORF21600P | |
| 21605 | ATPase | |||
| plasmid pSF-173-1 | ||||
| 25400 | 73 aa hypothetical protein | |||
| 25405 | M | M.Sen527ORF25750P (99% identity) | M.EcoSF173ORF25405P | |
| 25410 | 99 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5970 | 163 aa hypothetical protein | |||
| 5975 | R | EspFAAGmrSDP (100% identity) | EcoSF173GmrSD2P | |
| 5980 | damage-inducible protein DinI | |||
| 21000 | GTP-binding protein | |||
| 21005 | R | EcosS1MrrP (100% identity) | EcoSF173MrrP | |
| 21010 | DEAD/DEAH box helicase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14525 | protein ninE | |||
| 14530 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.EcoSF173ORF14530P |
| 14535 | 146 aa hypothetical protein | |||