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Putative Desulfuromonas species WTL RM systems
Ref: Badalamenti,J.P. et al. unpublished
REBASE ref # 20348
Complete sequence: 3,958,620 bp
GenBank #: CP010802
REBASE acronym: DspWTL
Org_num: 16799
All begin DSOUD_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
1598 | 607 aa hypothetical protein | |||
1599 | M | M.GspSVRORF28860P (89% identity) | M.DspWTLORF1599P | |
1600 | S | S.GfeZ0531ORF1885P (48% identity) | S.DspWTLORF1599P | |
1601 | 338 aa hypothetical protein | |||
1602 | R | GspSVRORF28860P (84% identity) | DspWTLORF1599P | |
1603 | 228 aa hypothetical protein | |||
1977 | 171 aa hypothetical protein | |||
1978 | M | M.Dsp964ORF462P (90% identity) | M.DspWTLORF1978P | |
1979 | cytochrome c biogenesis protein CycH | |||
1980 | S | S.GspEPRMORF16205P (46% identity) | S.DspWTLORF1978P | |
1981 | 208 aa hypothetical protein | |||
1982 | R | Gel16401IP (82% identity) | DspWTLORF1978P | |
1984 | thioesterase superfamily | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
531 | 295 aa hypothetical protein | |||
532 | M | M.GspEPRMORF6155P (70% identity) | CCWGG | M.DspWTLORF532P |
??? | V | V.GspYXORF14560P (62% identity) | V.DspWTLORF532P | |
533 | R | R2.PbaW13Z2ORF33155P (62% identity) | CCWGG | DspWTLORF532P |
534 | 89 aa hypothetical protein | |||
879 | pectate lyase superfamily protein | |||
880 | M | M.GloSZORF2979P (69% identity) | M.DspWTLORF880P | |
881 | 201 aa hypothetical protein | |||
937 | very-short-patch-repair endonuclease | |||
938 | RM | Rti85039ORF5006P (50% identity) | DspWTLORF938P | |
939 | 398 aa hypothetical protein | |||
1047 | family transcriptional regulator | |||
1048 | RM | GspSVRORF1180P (69% identity) | DspWTLORF1048P | |
1049 | four helix bundle protein | |||
1561 | nucleotidyltransferase | |||
1562 | R | Ssp130192ORFFP (67% identity) | GGGCCC | DspWTLORF1563P |
1563 | M | M.Rsp24678ORF16835P (66% identity) | GGGCCC | M.DspWTLORF1563P |
1564 | ribonucleoside-diphosphate reductase class II | |||
2638 | transposase | |||
2639 | R | Ain12060ORF4190P (50% identity) | GTCGAC | DspWTLORF2640P |
2640 | M | M.Lpn7475ORFCP (47% identity) | GTCGAC | M.DspWTLORF2640P |
2641 | 113 aa hypothetical protein | |||
3339 | 287 aa hypothetical protein | |||
3340 | R | Asp43ORFPP (48% identity) | ACNNNNNCTCC | DspWTLORF3343BP |
3341 | transposase | |||
3342 | transposase | |||
??? | R | Asp43ORFPP (21% identity) | ACNNNNNCTCC | DspWTLORF3343AP |
3343 | M | M.Pdu1735ORF3815P (73% identity) | ACNNNNNCTCC | M.DspWTLORF3343P |
3344 | site-specific DNA recombinase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
3104 | HNH endonuclease | |||
3105 | M | M.AspI09ORF27420P (51% identity) | M.DspWTLORF3105P | |
3106 | R | Psp3121ORFKP (50% identity) | DspWTLORF3105P | |
3107 | histidine kinase |