Sphingopyxis species 113P3 |
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Putative Sphingopyxis species 113P3 RM systems
Ref: Ohtsubo,Y. et al. unpublished
REBASE ref # 20347
| Sequence length: | GenBank #: | |
| Chromosome: | 4,420,776 bp | CP009452 |
| plasmid unnamed: | 243,437 bp | CP009453 |
REBASE acronym: Ssp113
Org_num: 16798
All begin LH20_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1685 | DEAD/DEAH box helicase | |||
| 1690 | RM | CspNLF19ORF4355P (74% identity) | Ssp113ORF1690P | |
| 1695 | transcriptional regulator | |||
| 4665 | 76 aa hypothetical protein | |||
| 4670 | M | M.OanORF230P (52% identity) | M.Ssp113ORF4670P | |
| 4675 | 61 aa hypothetical protein | |||
| 4675 | 61 aa hypothetical protein | |||
| 4680 | M | M.SspDS9ORFKP (10% identity) | M.Ssp113ORF4680P | |
| 4685 | 78 aa hypothetical protein | |||
| 5370 | 330 aa hypothetical protein | |||
| 5375 | M | M.SxeQYYORFIP (87% identity) | M.Ssp113ORF5375P | |
| 5380 | ATPase AAA | |||
| 6755 | 73 aa hypothetical protein | |||
| 6760 | M | M.SspFD7ORF1507P (91% identity) | M.Ssp113ORF6760P | |
| 6765 | V | V.PmaOXR96SspFP (82% identity) | V.Ssp113ORF6760P | |
| 6770 | integrase | |||
| 10260 | 340 aa hypothetical protein | |||
| 10265 | M | M.SspLC363ORF2870P (93% identity) | GANTC | M.Ssp113ORF10265P |
| 10270 | dihydropteroate synthase | |||
| 12045 | ATPase (AAA+ superfamily) | |||
| 12050 | M | M.TscSA1ORF4770P (62% identity) | M.Ssp113ORF12050P | |
| 12055 | ATPase | |||
| 17100 | 122 aa hypothetical protein | |||
| 17105 | M | M.Bsp22803ORF12400P (72% identity) | GACGTC | M.Ssp113ORF17105P |
| 17110 | transposase | |||
| 17115 | transposase | |||
| 17120 | R | Bsp22803ORF12400P (63% identity) | GACGTC | Ssp113ORF17105P |
| 17125 | 114 aa hypothetical protein | |||
| 17810 | 176 aa hypothetical protein | |||
| 17815 | M | M.SspFD7ORF2894P (61% identity) | M.Ssp113ORF17815P | |
| 17820 | cytochrome c oxidase subunit 2 | |||
| plasmid unnamed | ||||
| 22050 | 432 aa hypothetical protein | |||
| ??? | M | M.CmaOT19ORF19850P (86% identity) | M.Ssp113ORFAP | |
| 22055 | 212 aa hypothetical protein | |||
| 22060 | 106 aa hypothetical protein | |||
| 22065 | 320 aa hypothetical protein | |||
| 22070 | 119 aa hypothetical protein | |||
| 22075 | 352 aa hypothetical protein | |||
| 22080 | C | C.BspSH203ORFAP (37% identity) | C.Ssp113ORFAP | |
| 22085 | 141 aa hypothetical protein | |||
| 22450 | 468 aa hypothetical protein | |||
| 22455 | RM | PspGA68ORF12585P (88% identity) | Ssp113ORF22455P | |
| 22460 | twitching motility protein PilT | |||