Cyanothece species BH68K |
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Putative Cyanothece species BH68K RM systems
Ref: Welsh,E.A. et al. Proc. Natl. Acad. Sci. U.S.A. 105 (39), 15094-15099 (2008)
REBASE ref # 10558
| Sequence length: | GenBank #: | |
| chromosome circular: | 4,934,271 bp | CP000806 (NC_010546) |
| chromosome linear: | 429,701 bp | CP000807 (NC_010547) |
REBASE acronym: Csp68K
Org_num: 1102
All begin cce_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome circular | ||||
| 13 | 31 aa hypothetical protein | |||
| 14 | M | M2.Cap3222ORF7955P (75% identity) | CMGCKG | M.Csp68KORF14P |
| 15 | R | Smu29453CORF4945P (24% identity) | CMGCKG | Csp68KORF14P |
| 16 | two-component sensor histidine kinase | |||
| 669 | 6-phosphofructokinase | |||
| ??? | M | M.Hbr392ORF18200P (46% identity) | M.Csp68KORF670P | |
| 672 | 87 aa hypothetical protein | |||
| 955 | 274 aa hypothetical protein | |||
| ??? | M | BamHI-like site-specific methyltransferase | GGATCC | M.Csp68KORF956P |
| 957 | riboflavin biosynthesis protein | |||
| 1071 | 98 aa hypothetical protein | |||
| 1072 | R | Bap122ORF2430P (55% identity) | CYCGRG | Csp68KORF1073P |
| 1073 | M | M.Cap3221ORF3245P (55% identity) | CYCGRG | M.Csp68KORF1073P |
| 1074 | magnesium chelatase, ATPase subunit D | |||
| 1096 | 111 aa hypothetical protein | |||
| 1097 | RM | 106 aa hypothetical protein | Csp68KORF1097AP | |
| 1098 | RM | MaeM03ORF8045P (47% identity) | Csp68KORF1097BP | |
| 1099 | 62 aa hypothetical protein | |||
| 1100 | 48 aa hypothetical protein | |||
| 1101 | 155 aa hypothetical protein | |||
| 1102 | RM | Nsp9414ORF46140P (19% identity) | Csp68KORF1097CP | |
| 1103 | 196 aa unknown | |||
| 1764 | NADH dehydrogenase subunit 3 | |||
| ??? | R | Pag365ORF424BP (81% identity) | CCTNNNNNAGG | Csp68KORF1765P |
| 1765 | M | M.PagC7805ORF17P (48% identity) | CCTNNNNNAGG | M.Csp68KORF1765P |
| 1766 | UPF0227-containing protein | |||
| 1766 | UPF0227-containing protein | |||
| 1767 | M | M.CwaWHORF727P (80% identity) | GTMKAC | M.Csp68KORF1767P |
| 1768 | probable transcriptional regulator | |||
| 1832 | 137 aa hypothetical protein | |||
| 1833 | R | CwaWHORF1214P (86% identity) | ATGCAT | Csp68KIII |
| 1834 | M | M.RspT23ORF300P (60% identity) | ATGCAT | M.Csp68KIII |
| 1835 | 71 aa hypothetical protein | |||
| 2279 | Lipolytic enzyme, G-D-S-L | |||
| 2280 | M | M.Csp4105ORF78990P (49% identity) | TTCGAA | M.Csp68KII |
| 2281 | R | PamM71ORF17880P (76% identity) | TTCGAA | Csp68KII |
| 2282 | asparaginyl-tRNA synthetase | |||
| 2326 | 40 aa hypothetical protein | |||
| 2327 | M | M.CwaWHORF4936P (75% identity) | GATC | M.Csp68KORF2327P |
| 2328 | Fe-S metabolism associated SufE | |||
| 2470 | 32 aa hypothetical protein | |||
| 2471 | RM | MaeFD4ORF11220P (23% identity) | Csp68KORF2471P | |
| 2472 | 258 aa unknown | |||
| 2549 | glucose-1-phosphate thymidylyltransferase | |||
| 2550 | R | Csp51472ORF1756P (100% identity) | CGCG | Csp68KVI |
| 2551 | M | M.Csp51472ORF1756P (100% identity) | CGCG | M.Csp68KVIP |
| 2552 | 732 aa unknown | |||
| 2583 | 154 aa hypothetical protein | |||
| ??? | R | Csp68KORF2587CP (37% identity) | CAGCTG | Csp68KORF2584P |
| 2587 | DNA methylase N-4/N-6 | |||
| 2583 | 154 aa hypothetical protein | |||
| 2584 | R | Csp68KORF2584P (37% identity) | CAGCTG | Csp68KORF2587CP |
| 2585 | R | Csp68KORF2584P (27% identity) | CAGCTG | Csp68KORF2587BP |
| 2586 | R | 98 aa hypothetical protein | CAGCTG | Csp68KORF2587AP |
| 2587 | M | M.Hsp7418ORF776P (27% identity) | CAGCTG | M.Csp68KORF2587P |
| 2588 | 132 aa unknown | |||
| 3195 | protease | |||
| 3196 | M | M.Csp51472ORF4548P (100% identity) | RGCGCY | M.Csp68KORF3196P |
| 3197 | transposase | |||
| 3198 | transposase | |||
| 3199 | transposase | |||
| 3200 | R | type II restriction enzyme HaeII | RGCGCY | Csp68KORF3196P |
| 3201 | coproporphyrinogen III oxidase, aerobic | |||
| 3472 | signal recognition particle protein | |||
| 3473 | M | M.Csp51472ORF2367P (100% identity) | GGWCC | M.Csp68KI |
| 3474 | R | Csp51472ORF2367P (100% identity) | GGWCC | Csp68KI |
| 3475 | 61 aa hypothetical protein | |||
| 3992 | exodeoxyribonuclease III | |||
| 3993 | M | M.Csp51472ORF906P (100% identity) | CGATCG | M.Csp68KORF3993P |
| 3994 | 188 aa hypothetical protein | |||
| 4467 | 86 aa hypothetical protein | |||
| 4468 | M | M.CwaWHORF5132P (80% identity) | M.Csp68KORF4468P | |
| 4469 | 942 aa hypothetical protein | |||
| 4510 | squalene-hopene-cyclase | |||
| 4511 | M | M.Csp51472ORF415P (100% identity) | GDGCHC | M.Csp68KORF4511P |
| 4512 | aspartate kinase | |||
| 4744 | 274 aa unknown | |||
| 4745 | M | M.NspN6ORF281P (63% identity) | GRCGYC | M.Csp68KORF4745P |
| 4746 | R | Cep9333ORF2554P (56% identity) | GRCGYC | Csp68KORF4745P |
| 4747 | 403 aa unknown | |||
| chromosome linear | ||||
| 5002 | 149 aa hypothetical protein | |||
| 5003 | RM | Mae44ORF2306P (55% identity) | Csp68KORF5003P | |
| 5004 | 41 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome circular | ||||
| 595 | glucokinase | |||
| 596 | R | Csp8802MrrP (56% identity) | Csp68KMrrP | |
| 597 | 621 aa hypothetical protein | |||
| 1225 | 141 aa hypothetical protein | |||
| 1226 | R | CspCCYMcrBP (66% identity) | Csp68KMcrBP | |
| 1227 | 111 aa hypothetical protein | |||
| 1228 | 149 aa hypothetical protein | |||
| 1229 | R | CspCCYMcrCP (78% identity) | Csp68KMcrCP | |
| 1230 | anion-transporting ATPase | |||
| 2416 | 35 aa hypothetical protein | |||
| 2417 | R | CwaWHMrrP (84% identity) | Csp68KMrr2P | |
| 2418 | 112 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome circular | ||||
| 1060 | 86 aa conserved hypothetical protein | |||
| 1061 | M | M.Csp8801ORF1989P (63% identity) | GGCC | M.Csp68KV |
| 1062 | YrdC-like RNA-binding protein | |||
| 1212 | 76 aa hypothetical protein | |||
| 1213 | M | M.Csp51472ORF1033P (100% identity) | CCGG | M.Csp68KIV |
| 1214 | nitrate reductase | |||