Leptotrichia species oral taxon 212 W10393 |
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Putative Leptotrichia species oral taxon 212 W10393 RM systems
Ref: Holder,M.E. et al. unpublished
REBASE ref # 20000
Complete sequence: 2,444,904 bp
GenBank #: CP012410
REBASE acronym: Lsp10393
Org_num: 16689
All begin AMK43_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 570 | 67 aa hypothetical protein | |||
| 575 | R | Lho16775ORF2276P (88% identity) | GATC | Lsp10393IIP |
| 580 | M | M.Lho16775ORF2276P (90% identity) | GATC | M.Lsp10393II |
| 585 | glutamyl-tRNA amidotransferase | |||
| 595 | glutamyl-tRNA amidotransferase | |||
| 600 | M | M.Fpo10562ORF8350P (69% identity) | M.Lsp10393ORF600P | |
| 605 | R | Fnu2878ORF680P (60% identity) | Lsp10393ORF600P | |
| 610 | glutamyl-tRNA amidotransferase | |||
| 7380 | chromosome segregation protein SMC | |||
| 7385 | M | M.FnuW1481ORFBP (56% identity) | M.Lsp10393ORF7385P | |
| 7390 | 546 aa hypothetical protein | |||
| 7525 | 205 aa hypothetical protein | |||
| 7530 | M | M.Rgns29149ORF255P (54% identity) | M.Lsp10393ORF7530P | |
| 7535 | adenylosuccinate lyase | |||
| 11025 | DNA-binding protein | |||
| 11030 | M | M.PbaW5028I (93% identity) | GCATC | M.Lsp10393I |
| 11035 | R | PmiKCG1ORF4040P (97% identity) | GCATC | Lsp10393IP |
| 11040 | ATP/GTP-binding protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6855 | 347 aa hypothetical protein | |||
| 6860 | R | CprX2ORF18570P (66% identity) | Lsp10393ORF6895P | |
| 6865 | 200 aa hypothetical protein | |||
| 6870 | 60 aa hypothetical protein | |||
| 6875 | 160 aa hypothetical protein | |||
| 6880 | 68 aa hypothetical protein | |||
| 6885 | pseudogene | |||
| 6890 | RNA-directed DNA polymerase | |||
| 6895 | M | M.Lwa3936ORF2157P (67% identity) | M.Lsp10393ORF6895P | |
| 6900 | pseudogene | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5765 | DNA polymerase III | |||
| 5770 | R | Lgo16774ORF1262P (74% identity) | Lsp10393ORF5770P | |
| 5775 | pseudogene | |||