Lampropedia species CT6 |
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Putative Lampropedia species CT6 RM systems
Ref: Tripathi,C. et al. unpublished
REBASE ref # 22705
Contig set: 3,158,922 bp
GenBank #: LBNQ00000000 (NZ_LBNQ00000000)
REBASE acronym: LspCT6
Org_num: 16415
All begin AAV94_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3075 | tRNA modification GTPase TrmE | |||
| 3080 | M | M.DdaXJ12ORFDP (85% identity) | M.LspCT6ORF3080P | |
| 3085 | S | S.PaeLo166ORF25600P (60% identity) | S.LspCT6ORF3080P | |
| 3090 | MloB | |||
| 3095 | cytochrome C | |||
| 3100 | R | PaeZU31ORF26045P (90% identity) | LspCT6ORF3080P | |
| 3105 | 192 aa hypothetical protein | |||
| 5945 | 62 aa hypothetical protein | |||
| 5950 | M | M1.AspJSORF3609P (97% identity) | M1.LspCT6ORF5950P | |
| 5955 | M | M2.PmeTTORFCP (88% identity) | M2.LspCT6ORF5950P | |
| 5960 | S | S.Dsp3051ORF16555P (37% identity) | S.LspCT6ORF5950P | |
| 5965 | R | Mko45383ORF14405P (86% identity) | LspCT6ORF5950P | |
| 5970 | 570 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7190 | 127 aa hypothetical protein | |||
| 7195 | R | HaeGOM5ORF6605P (82% identity) | GGATC | LspCT6ORF7205P |
| 7200 | 61 aa hypothetical protein | |||
| 7205 | M | M.HaeGOM5ORF6605P (95% identity) | GGATC | M.LspCT6ORF7205P |
| 7210 | DNA-binding protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7920 | pseudogene | |||
| 7925 | R | Ppa10489ORF18030P (98% identity) | LspCT6ORF7930P | |
| 7930 | M | M.Rba558ORF7880P (72% identity) | M.LspCT6ORF7930P | |
| 7935 | plasmid maintenance system antidote protein | |||