Prevotella fusca JCM 17724 W1435 |
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Putative Prevotella fusca JCM 17724 W1435 RM systems
Ref: Holder,M.E. et al. unpublished
REBASE ref # 20000
| Sequence length: | GenBank #: | |
| chromosome 1: | 1,828,248 bp | CP012074 |
| chromosome 1: | 1,828,273 bp | CP072370 |
| chromosome 2: | 1,433,558 bp | CP012075 |
| chromosome 2: | 1,433,515 bp | CP072369 |
REBASE acronym: Pfu17724
Org_num: 16425
All begin ADJ77_, J5A51_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 7895 | mechanosensitive ion channel | |||
| 7900 | M | M.Pje697ORF505P (47% identity) | M.PfuW1435ORF7900P | |
| 7905 | 544 aa hypothetical protein | |||
| chromosome 2 | ||||
| 10945 | 337 aa hypothetical protein | |||
| 10950 | M | M.PfuW1435II (100% identity) | CRTANNNNNNNCTG | M.Pfu17724I |
| 10955 | S | S.PfuW1435II (100% identity) | CRTANNNNNNNCTG | S.Pfu17724I |
| 10960 | R | PfuW1435IIP (99% identity) | CRTANNNNNNNCTG | Pfu17724IP |
| 10965 | 131 aa hypothetical protein | |||
| chromosome 2 | ||||
| 1200 | WYL domain-containing protein | |||
| 1205 | M | M.Pfu17724I (100% identity) | CRTANNNNNNNCTG | M.PfuW1435II |
| 1210 | S | S.Pfu17724I (100% identity) | CRTANNNNNNNCTG | S.PfuW1435II |
| 1215 | R | Pfu17724IP (99% identity) | CRTANNNNNNNCTG | PfuW1435IIP |
| 1220 | 154 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1260 | lysyl-tRNA synthetase | |||
| 1265 | R | PfuW1435ORF8410P (100% identity) | GGCC | Pfu17724ORF1270P |
| 1270 | M | M.PfuW1435ORF8410P (100% identity) | GGCC | M.Pfu17724ORF1270P |
| 1275 | peroxiredoxin | |||
| 1855 | 130 aa hypothetical protein | |||
| 1860 | M | M1.PfuW1435ORF9005P (99% identity) | M.Pfu17724ORF1860P | |
| 1865 | 248 aa hypothetical protein | |||
| 1860 | 356 aa hypothetical protein | |||
| 1865 | M | M2.PfuW1435ORF9005P (91% identity) | GAATTC | M.Pfu17724ORF1865P |
| 1870 | 154 aa hypothetical protein | |||
| 7025 | helicase | |||
| 7030 | RM | PfuW1435ORF6730P (100% identity) | Pfu17724ORF7030P | |
| 7035 | 217 aa hypothetical protein | |||
| chromosome 1 | ||||
| 6725 | helicase | |||
| 6730 | RM | Pfu17724ORF7030P (100% identity) | PfuW1435ORF6730P | |
| 6735 | DUF4145 domain-containing protein | |||
| 8400 | lysine--tRNA ligase | |||
| 8405 | R | Pfu17724ORF1270P (100% identity) | PfuW1435ORF8410P | |
| 8410 | M | M.Pfu17724ORF1270P (100% identity) | M.PfuW1435ORF8410P | |
| 8415 | AhpC/TSA family protein | |||
| 9000 | P27 family phage terminase small subunit | |||
| 9005 | M | M.Pfu17724ORF1860P (99% identity) | M1.PfuW1435ORF9005P | |
| 9010 | M | M.Pfu17724ORF1865P (91% identity) | M2.PfuW1435ORF9005P | |
| 9015 | 154 aa hypothetical protein | |||
| chromosome 2 | ||||
| 8075 | ATPase | |||
| 8080 | M | M.PfuW1435ORF3930P (100% identity) | M.Pfu17724ORF8080P | |
| 8085 | C | C.Psc2052ORF11790P (100% identity) | C.Pfu17724ORF8080P | |
| 8090 | 141 aa hypothetical protein | |||
| 11100 | topoisomerase I | |||
| 11105 | M | M1.PfuW1435ORF1370P (70% identity) | CCCGC | M1.Pfu17724ORF11105P |
| 11110 | R | PfuW1435ORF1370P (100% identity) | CCCGC | Pfu17724ORF11105P |
| 11115 | M | M2.PfuW1435ORF1370P (100% identity) | CCCGC | M2.Pfu17724ORF11105P |
| 11120 | XRE family transcriptional regulator | |||
| 11455 | pseudogene | |||
| 11460 | R | PfuW1435ORF1720P (100% identity) | CCGG | Pfu17724ORF11465P |
| 11465 | M | M.PfuW1435ORF1720P (100% identity) | CCGG | M.Pfu17724ORF11465P |
| 11470 | flavoprotein | |||
| 12360 | 102 aa hypothetical protein | |||
| 12365 | M | M.PfuW1435I (100% identity) | ATCGAT | M.Pfu17724II |
| 12370 | 373 aa hypothetical protein | |||
| chromosome 2 | ||||
| 1365 | NERD domain-containing protein | |||
| 1370 | M | M1.Pin2838ORF11420P (99% identity) | M1.PfuW1435ORF1370P | |
| 1375 | R | Pfu17724ORF11105P (100% identity) | PfuW1435ORF1370P | |
| 1380 | M | M2.Pfu17724ORF11105P (100% identity) | M2.PfuW1435ORF1370P | |
| 1385 | 50 aa hypothetical protein | |||
| 1710 | IS1380 family transposase | |||
| 1715 | R | Pfu17724ORF11465P (100% identity) | PfuW1435ORF1720P | |
| 1720 | M | M.Pfu17724ORF11465P (100% identity) | M.PfuW1435ORF1720P | |
| 1725 | NAD(P)/FAD-dependent oxidoreductase | |||
| 2590 | helix-turn-helix transcriptional regulator | |||
| 2595 | M | M.Pfu17724II (100% identity) | ATCGAT | M.PfuW1435I |
| 2600 | 373 aa hypothetical protein | |||
| 3925 | ATP-binding protein | |||
| 3930 | M | M.Pfu17724ORF8080P (100% identity) | M.PfuW1435ORF3930P | |
| 3935 | C | C.Psc2052ORF11790P (100% identity) | C.PfuW1435ORF3930P | |
| 3940 | 141 aa hypothetical protein | |||