Salmonella enterica subsp. enterica serovar Agona 30.H.04 |
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Putative Salmonella enterica subsp. enterica serovar Agona 30.H.04 RM systems
Ref: Zhou,Z. et al. PLoS Genet. 9 (4), E1003471 (2013)
REBASE ref # 19162
Contig set: 4,867,442 bp
GenBank #: CATW00000000 (NZ_CATW00000000)
REBASE acronym: Sen30H04
Org_num: 16244
All begin SA30_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2546 | filamentation induced by cAMP protein Fic | |||
| 2547 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen30H04ORF2549P |
| 2548 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen30H04ORF2549P |
| 2549 | M | M2.SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | M2.Sen30H04ORF2549P |
| 2550 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen30H04ORF2549P |
| 2551 | protein TIR | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2583 | metal dependent phosphohydrolase | |||
| 2584 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen30H04DcmP |
| 2585 | V | V.StyUK1DcmP (100% identity) | V.Sen30H04DcmP | |
| 2586 | carboxylate/amino acid/amine transporter | |||
| 4742 | ribulose-phosphate 3-epimerase | |||
| 4743 | M | M.StyTDamP (100% identity) | GATC | M.Sen30H04DamP |
| 4744 | protein DamX | |||
| 3237 | periplasmic protein | |||
| 3238 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen30H04ORF3238P |
| 3239 | DNA-binding protein Fis | |||
| 3318 | 57 aa Conserved hypothetical plasmid protein | |||
| 3319 | M | M.StyR64ORFAP (100% identity) | M.Sen30H04ORF3319P | |
| 3320 | protein YubE | |||
| 2565 | 670 aa hypothetical protein | |||
| 2566 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen30H04ORF2566P |
| 2567 | 97 aa hypothetical protein | |||
| 478 | DksA/TraR family C4-type zinc finger protein | |||
| 479 | M | M.SenSA5ORF21849P (100% identity) | GATC | M.Sen30H04ORF479P |
| 480 | bacteriophage replication gene A | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3584 | major facilitator superfamily MFS_1 | |||
| 3585 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen30H04ORF3585P |
| 3586 | R | SenSA5ORF13013P (100% identity) | CAGAG | Sen30H04ORF3585P |
| 3587 | cyanide-insensitive oxidase CioA | |||