Salmonella enterica subsp. enterica serovar Agona 26.F.98 |
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Putative Salmonella enterica subsp. enterica serovar Agona 26.F.98 RM systems
Ref: Zhou,Z. et al. PLoS Genet. 9 (4), E1003471 (2013)
REBASE ref # 19162
Contig set: 4,731,017 bp
GenBank #: CATX00000000 (NZ_CATX00000000)
REBASE acronym: Sen26F98
Org_num: 16245
All begin SA26_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3515 | protein TIR | |||
| 3516 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen26F98ORF3516P |
| 3517 | M | M2.SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | M2.Sen26F98ORF3516P |
| 3518 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen26F98ORF3516P |
| 3519 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen26F98ORF3516P |
| 3520 | filamentation induced by cAMP protein Fic | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3499 | 97 aa hypothetical protein | |||
| 3500 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen26F98ORF3500P |
| 3501 | 670 aa hypothetical protein | |||
| 4202 | protein DamX | |||
| 4203 | M | M.StyTDamP (100% identity) | GATC | M.Sen26F98DamP |
| 4204 | ribulose-phosphate 3-epimerase | |||
| 2344 | bacteriophage replication gene A | |||
| 2345 | M | M.SenSA5ORF21849P (100% identity) | GATC | M.Sen26F98ORF2345P |
| 2346 | DksA/TraR family C4-type zinc finger protein | |||
| 1423 | DNA-binding protein Fis | |||
| 1424 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen26F98ORF1424P |
| 1425 | periplasmic protein | |||
| 529 | carboxylate/amino acid/amine transporter | |||
| 530 | V | V.StyUK1DcmP (100% identity) | V.Sen26F98DcmP | |
| 531 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen26F98DcmP |
| 532 | metal dependent phosphohydrolase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3270 | major facilitator superfamily MFS_1 | |||
| 3271 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen26F98ORF3271P |
| 3272 | R | SenSA5ORF13013P (100% identity) | CAGAG | Sen26F98ORF3271P |
| 3273 | cyanide-insensitive oxidase CioA | |||