Salmonella enterica subsp. enterica serovar Agona 36.H.00 |
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Putative Salmonella enterica subsp. enterica serovar Agona 36.H.00 RM systems
Ref: Zhou,Z. et al. PLoS Genet. 9 (4), E1003471 (2013)
REBASE ref # 19162
Contig set: 4,790,186 bp
GenBank #: CASI00000000 (NZ_CASI00000000)
REBASE acronym: Sen36H00
Org_num: 16211
All begin SA36_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2161 | filamentation induced by cAMP protein Fic | |||
| 2162 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen36H00ORF2164P |
| 2163 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen36H00ORF2164P |
| 2164 | M | M2.SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | M2.Sen36H00ORF2164P |
| 2165 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen36H00ORF2164P |
| 2166 | protein TIR | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2802 | periplasmic protein | |||
| 2803 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen36H00ORF2803P |
| 2804 | DNA-binding protein Fis | |||
| 4684 | protein DamX | |||
| 4685 | M | M.StyTDamP (100% identity) | GATC | M.Sen36H00DamP |
| 4686 | ribulose-phosphate 3-epimerase | |||
| 3897 | Crossover junction endodeoxyribonuclease rusA | |||
| 3898 | M | M.Sen8646ORF17540P (99% identity) | GATC | M.Sen36H00ORF3898P |
| 3899 | protein Phage | |||
| 61 | DksA/TraR family C4-type zinc finger protein | |||
| ??? | M | M.SflLIN17ORF14475P (100% identity) | GATC | M.Sen36H00ORFAP |
| 62 | bacteriophage replication gene A | |||
| 4000 | carboxylate/amino acid/amine transporter | |||
| 4001 | V | V.StyUK1DcmP (100% identity) | V.Sen36H00DcmP | |
| 4002 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen36H00DcmP |
| 4003 | metal dependent phosphohydrolase | |||
| 2180 | 670 aa hypothetical protein | |||
| 2181 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen36H00ORF2181P |
| 2182 | 97 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1015 | cyanide-insensitive oxidase CioA | |||
| 1016 | R | SenSA5ORF13013P (100% identity) | CAGAG | Sen36H00ORF1017P |
| 1017 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen36H00ORF1017P |
| 1018 | major facilitator superfamily MFS_1 | |||