Salmonella enterica subsp. enterica serovar Agona 48.E.08 |
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Putative Salmonella enterica subsp. enterica serovar Agona 48.E.08 RM systems
Ref: Zhou,Z. et al. PLoS Genet. 9 (4), E1003471 (2013)
REBASE ref # 19162
Contig set: 4,744,150 bp
GenBank #: CARY00000000 (NZ_CARY00000000)
REBASE acronym: Sen48E08
Org_num: 16203
All begin SA48_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2904 | filamentation induced by cAMP protein Fic | |||
| 2905 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen48E08ORF2907P |
| 2906 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen48E08ORF2907P |
| 2907 | M | M2.SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | M2.Sen48E08ORF2907P |
| 2908 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen48E08ORF2907P |
| 2909 | protein TIR | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1854 | metal dependent phosphohydrolase | |||
| 1855 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen48E08DcmP |
| 1856 | V | V.StyUK1DcmP (100% identity) | V.Sen48E08DcmP | |
| 1857 | carboxylate/amino acid/amine transporter | |||
| 4659 | uncharacterized protein | |||
| 4660 | M | M.Sen76333ORF16870P (94% identity) | GATC | M.Sen48E08ORF4660P |
| 4661 | Gp51 family protein | |||
| 4179 | periplasmic protein | |||
| 4180 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen48E08ORF4180P |
| 4181 | DNA-binding protein Fis | |||
| 4599 | protein DamX | |||
| 4600 | M | M.StyTDamP (100% identity) | GATC | M.Sen48E08DamP |
| 4601 | ribulose-phosphate 3-epimerase | |||
| 61 | 113 aa hypothetical protein | |||
| 62 | M | M.SenSH7ORF6070P (100% identity) | GATC | M.Sen48E08ORF62P |
| 63 | bacteriophage replication gene A | |||
| 64 | 62 aa hypothetical protein | |||
| 65 | M | M.SenSH7ORF6090P (100% identity) | CGGCCG | M.Sen48E08ORF65P |
| ??? | R | SenSH7ORF6090P (100% identity) | CGGCCG | Sen48E08ORF65P |
| 67 | pbsx family phage portal protein | |||
| 2923 | 670 aa hypothetical protein | |||
| 2924 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen48E08ORF2924P |
| 2925 | 97 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 314 | major facilitator superfamily MFS_1 | |||
| 315 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen48E08ORF315P |
| 316 | R | SenSA5ORF13013P (100% identity) | CAGAG | Sen48E08ORF315P |
| 317 | cyanide-insensitive oxidase CioA | |||