Salmonella enterica subsp. enterica serovar Agona 392869-2 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Agona 392869-2 RM systems
Ref: Strain,E.A. et al. unpublished
REBASE ref # 13225
| Sequence length: | GenBank #: | |
| Chromosome: | 4,798,531 bp | CP015024 |
| Chromosome: | 4,768,952 bp | AYDG00000000 (NZ_AYDG00000000) |
REBASE acronym: Sen8692
Org_num: 16151
All begin SEEA8692_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19620 | Fic family protein | |||
| 19625 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen8692IIP |
| 19630 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen8692II |
| 19635 | M | M2.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M2.Sen8692II |
| 19640 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen8692II |
| 19645 | toll/interleukin-1 receptor domain-containing | |||
| Chromosome | ||||
| 8001 | TIR protein | |||
| 8006 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen8692II |
| ??? | M | M2.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M2.Sen8692II |
| 8016 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen8692II |
| 8021 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen8692IIP |
| 8026 | 310 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1800 | cell division protein DamX | |||
| 1805 | M | M.StyTDamP (100% identity) | GATC | M.Sen8692DamP |
| 1810 | ribulose-phosphate 3-epimerase | |||
| 2295 | DUF2556 domain-containing protein | |||
| 2300 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen8692III |
| 2305 | DNA-binding transcriptional regulator Fis | |||
| 5610 | TraR/DksA family transcriptional regulator | |||
| 5615 | M | M.SenSA5ORF21849P (100% identity) | GATC | M.Sen8692ORF13796P |
| 5620 | replication endonuclease | |||
| 13825 | drug/metabolite exporter YedA | |||
| 13830 | V | V.StyUK1DcmP (100% identity) | V.Sen8692DcmP | |
| 13835 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen8692DcmP |
| 13840 | phosphohydrolase | |||
| 19695 | DUF87 domain-containing protein | |||
| 19700 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen8692ORF19700P |
| 19705 | 97 aa hypothetical protein | |||
| Chromosome | ||||
| 7926 | 97 aa hypothetical protein | |||
| ??? | M | M.SenSA2ORF2906P (99% identity) | CAGCTG | M.Sen8692ORF7931P |
| 7941 | 670 aa hypothetical protein | |||
| 16824 | ribulose-phosphate 3-epimerase | |||
| 16829 | M | M.StyTDamP (100% identity) | GATC | M.Sen8692DamP |
| 16834 | cell division protein DamX | |||
| 13791 | 745 aa hypothetical protein | |||
| 13796 | M | M.SenSA5ORF21849P (100% identity) | GATC | M.Sen8692ORF13796P |
| 13801 | C4-type zinc finger protein, DksA/TraR family | |||
| 9609 | hydrolase | |||
| 9614 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen8692DcmP |
| 9619 | V | V.StyUK1DcmP (100% identity) | V.Sen8692DcmP | |
| 9624 | DMT superfamily transporter inner | |||
| 11392 | global DNA-binding transcriptional dual | |||
| 11397 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen8692III |
| 11402 | periplasmic protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17365 | 33 aa hypothetical protein | |||
| 17370 | R | SenS12VPHORF9140P (100% identity) | CAGAG | Sen8692IP |
| 17375 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen8692I |
| 17380 | MFS transporter | |||
| Chromosome | ||||
| 13159 | major facilitator superfamily MFS 1 | |||
| 13164 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen8692I |
| 13169 | R | SenS12VPHORF9140P (100% identity) | CAGAG | Sen8692IP |
| 13174 | 33 aa hypothetical protein | |||