Vibrio cholerae 984-81 |
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Putative Vibrio cholerae 984-81 RM systems
Ref: Bishop-Lilly,K.A. et al. Genome Announc 2 (5), e00893-14 (2014)
REBASE ref # 18254
Contig set: 3,946,950 bp
GenBank #: JMBM00000000 (NZ_JMBM00000000)
REBASE acronym: Vch98481
Org_num: 16259
All begin DN42_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1951 | cro/C1-type HTH DNA-binding domain protein | |||
| 1952 | M | M1.Sal2NE11ORF22300P (98% identity) | M1.Vch98481ORF1952P | |
| 1953 | M | M2.SxiFH1ORF60P (97% identity) | M2.Vch98481ORF1952P | |
| 1954 | S | S.VpaS145ORFAP (94% identity) | S.Vch98481ORF1952P | |
| 1955 | R | SxiFH1ORF60P (97% identity) | Vch98481ORF1952P | |
| 1956 | virulence RhuM family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.VchHE45ORF2619P (98% identity) | M.Vch98481ORFAP | |
| 1081 | guanosine monophosphate reductase | |||
| 1980 | 195 aa hypothetical protein | |||
| 1981 | M | M.SspW3ORF4074P (99% identity) | CTGCAG | M.Vch98481ORF1981P |
| 1982 | R | Sen86ORF22630P (99% identity) | CTGCAG | Vch98481ORF1981P |
| 1983 | 214 aa hypothetical protein | |||
| 956 | sporulation related domain protein | |||
| 957 | M | M.VspNIH41DamP (100% identity) | GATC | M.Vch98481DamP |
| 958 | ribulose-phosphate 3-epimerase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 620 | 228 aa hypothetical protein | |||
| 621 | M | M.Ssp354III (99% identity) | M.Vch98481ORF621P | |
| 622 | R | Vfl560ORFBP (99% identity) | Vch98481ORF621P | |
| 623 | NMD3 family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2454 | 30 aa hypothetical protein | |||
| 2455 | R | VchL1271ORFBP (99% identity) | Vch98481ORF2455P | |
| 2456 | 75 aa hypothetical protein | |||