Vibrio crassostreae J5-5 |
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Putative Vibrio crassostreae J5-5 RM systems
Ref: Le Roux,Frederique. unpublished
REBASE ref # 20019
GenBank #: CCJV00000000
REBASE acronym: VcrJ55
Org_num: 16248
All begin VCR5J5_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1330001 | Integrase family protein | |||
| 1330002 | M | M.Vcr22240ORFHP (100% identity) | M.VcrJ55ORF1330002P | |
| 1330003 | S | S.Vcr22240ORFHP (100% identity) | S.VcrJ55ORF1330002P | |
| 1330004 | 424 aa hypothetical protein | |||
| 1330005 | 382 aa conserved hypothetical protein | |||
| 1330006 | R | Vcr22240ORFHP (100% identity) | VcrJ55ORF1330002P | |
| 1330007 | 55 aa hypothetical protein | |||
| 1280014 | integrase/recombinase y4qK (fragment) | |||
| 1280015 | R | Spu10736IIP (93% identity) | VcrJ55ORF1280018P | |
| 1280016 | 352 aa conserved hypothetical protein | |||
| 1280017 | S | S.VsiYA2ORF10075P (88% identity) | S.VcrJ55ORF1280018P | |
| 1280018 | M | M.VspFE10ORFDP (98% identity) | M.VcrJ55ORF1280018P | |
| 1280019 | Integrase family protein | |||
| 1370269 | 58 aa conserved hypothetical protein | |||
| 1370270 | M | M1.Vvu2444ORFEP (97% identity) | M1.VcrJ55ORF1370270P | |
| 1370271 | M | M2.VspVB16ORF10310P (98% identity) | M2.VcrJ55ORF1370270P | |
| 1370272 | S | S.RorR1I (42% identity) | S.VcrJ55ORF1370270P | |
| 1370273 | R | VvuYORF2206P (98% identity) | VcrJ55ORF1370270P | |
| 1370274 | 342 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1560010 | 82 aa hypothetical protein | |||
| 1560011 | R | Vcr22240ORFGP (100% identity) | CAGCTG | VcrJ55ORF1560012P |
| 1560012 | M | M.Vcr22240ORFGP (100% identity) | CAGCTG | M.VcrJ55ORF1560012P |
| 1560013 | 52 aa conserved hypothetical protein | |||
| 750065 | 63 aa conserved hypothetical protein | |||
| 750066 | M | M.Vcr22240ORFEP (100% identity) | M.VcrJ55ORF750066P | |
| 750067 | Virulence protein MsgA | |||
| 1360096 | 69 aa hypothetical protein | |||
| ??? | M | hypothetical protein | TGGCCA | M.VcrJ55ORF1360097P |
| 1360099 | 134 aa conserved hypothetical protein | |||
| 690103 | 505 aa conserved hypothetical protein | |||
| 690104 | M | M.VspEvh12ORFBP (100% identity) | GATC | M.VcrJ55DamP |
| 690105 | Ribulose-phosphate 3-epimerase | |||
| 1370259 | 226 aa hypothetical protein | |||
| 1370260 | M | M.VspSa110ORFFP (100% identity) | GATC | M.VcrJ55ORF1370260P |
| 1370261 | prophage protein; putative DNA-binding | |||