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Putative Ruminococcus species UNK.MGS-30 RM systems
Ref: Jeraldo,P. et al. Genome Announc 3 (3), e00526-15 (2015)
REBASE ref # 19864
Contig set: 2,955,898 bp
GenBank #: LBCK00000000 (NZ_LBCK00000000)
REBASE acronym: RspMGS30
Org_num: 16163
All begin
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
??? | R | PmeBin128ORFFP (100% identity) | RspMGS30ORFKP | |
??? | S | S2.PmeBin128ORFFP (100% identity) | S1.RspMGS30ORFKP | |
??? | S | S1.PmeBin128ORFFP (100% identity) | S2.RspMGS30ORFKP | |
??? | M | M.PmeBin128ORFFP (100% identity) | M.RspMGS30ORFKP | |
??? | M | M.Rsp7ORFCP (87% identity) | YTCANNNNNNNTCNNC | M.RspMGS30ORFBP |
??? | S | S1.Mci10181ORF866P (32% identity) | YTCANNNNNNNTCNNC | S.RspMGS30ORFBP |
??? | R | Rsp7ORFCP (69% identity) | YTCANNNNNNNTCNNC | RspMGS30ORFBP |
??? | M | M.Rho2517ORFCP (73% identity) | M.RspMGS30ORFDP | |
??? | R | PmeBin371ORFDP (99% identity) | RspMGS30ORFHP | |
??? | S | S.PmeBin371ORFDP (100% identity) | S.RspMGS30ORFHP | |
??? | M | M.PmeBin371ORFDP (100% identity) | M.RspMGS30ORFHP | |
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
??? | M | cytosine methyltransferase | GGCC | M.RspMGS30ORFNP |
??? | M | M.EbaES3ORF7145P (69% identity) | M.RspMGS30ORFMP | |
??? | M | M.PmeBin371ORFEP (100% identity) | GATC | M.RspMGS30ORFLP |
??? | M | M.RspMGS30ORFNP (60% identity) | M1.RspMGS30ORFJP | |
??? | M | M2.RspMGS30ORFAP (89% identity) | M2.RspMGS30ORFJP | |
??? | M | M.PmeBin480ORFBP (70% identity) | CTGCAG | M.RspMGS30ORFIP |
??? | R | Sco17374ORF247P (74% identity) | CTGCAG | RspMGS30ORFIP |
??? | M | M.AcaL192ORF14640P (60% identity) | M1.RspMGS30ORFAP | |
??? | M | M2.RspMGS30ORFJP (89% identity) | M2.RspMGS30ORFAP | |
??? | RM | Fpr3ORF23770P (50% identity) | RspMGS30ORFCAP | |
??? | RM | Rsp18ORF8020P (78% identity) | RspMGS30ORFCBP | |
??? | M | M1.RspMGS30ORFJP (82% identity) | GGCC | M.RspMGS30ORFGP |
??? | DNA methylase | |||
??? | hypothetical protein | |||
??? | M | M.Sru3002ORFGP (72% identity) | M.RspMGS30ORFFP | |
??? | M | M.Esi703ORF9760P (52% identity) | M1.RspMGS30ORFEP | |
??? | M | M.Rsp80ORF263P (83% identity) | M2.RspMGS30ORFEP | |
??? | R | LbaD12ORFDP (58% identity) | TTTAAA | RspMGS30ORFPP |
??? | M | M.PmeBin167ORFCP (71% identity) | TTTAAA | M.RspMGS30ORFPP |
??? | R | RspFMBCY1ORF8870P (48% identity) | CGCG | RspMGS30ORFOP |
??? | M | M.RspFMBCY1ORF8870P (71% identity) | CGCG | M.RspMGS30ORFOP |