Escherichia coli K1884 sc |
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Putative Escherichia coli K1884 sc RM systems
Ref: Pattabiraman,V. and Bopp,C.A. Genome Announc 3 (3), e00564-15 (2015)
REBASE ref # 19841
Contig set: 4,993,339 bp
GenBank #: JYIC00000000 (NZ_JYIC00000000)
REBASE acronym: EcoK1884
Org_num: 16318
All begin UH29_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19095 | membrane protein | |||
| 19100 | R | Ecos53ORF20340P (100% identity) | EcoK1884ORF19110P | |
| 19105 | S | S.Ecos53ORF20340P (100% identity) | S.EcoK1884ORF19110P | |
| 19110 | M | M.SenS0935ORF770P (99% identity) | M.EcoK1884ORF19110P | |
| 19115 | addiction module antitoxin | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16050 | LexA family transcriptional regulator | |||
| 16055 | M | M.SflLIN17ORF17440P (100% identity) | GATC | M.EcoK1884ORF16055P |
| 16060 | 162 aa hypothetical protein | |||
| 23125 | 73 aa hypothetical protein | |||
| 23130 | M | M.Sen4346ORF22715P (100% identity) | M.EcoK1884ORF23130P | |
| 23135 | 67 aa hypothetical protein | |||
| 13180 | 59 aa hypothetical protein | |||
| 13185 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoK1884ORF13185P |
| 13190 | Fis family transcriptional regulator | |||
| 3295 | multidrug DMT transporter | |||
| 3300 | V | V.SsoSE61DcmP (100% identity) | V.EcoK1884DcmP | |
| 3305 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcoK1884DcmP |
| 3310 | hydrolase | |||
| 15945 | 71 aa hypothetical protein | |||
| 15950 | M | M.KpnYN1ORFGP (89% identity) | M.EcoK1884ORF15950P | |
| 15955 | DNA-binding protein | |||
| 16665 | integrase | |||
| 16670 | M | M.EcoS7380ORFCP (100% identity) | M.EcoK1884ORF16670P | |
| 16675 | 366 aa hypothetical protein | |||
| 12030 | cell division protein DamX | |||
| 12035 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoK1884DamP |
| 12040 | ribulose-phosphate 3-epimerase | |||
| 4730 | transcriptional regulator | |||
| 4735 | M | M.EcosE1ORFEP (100% identity) | GATC | M.EcoK1884ORF4735P |
| 4740 | 64 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3380 | ATP-dependent helicase | |||
| ??? | M | M.EcoRS571ORF20935P (100% identity) | GAACC | M.EcoK1884ORF3385P |
| 3390 | R | SflN116ORF19490P (100% identity) | GAACC | EcoK1884ORF3385P |
| 3395 | 100 aa hypothetical protein | |||