Lactobacillus rhamnosus CNCM-I-3698 |
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Putative Lactobacillus rhamnosus CNCM-I-3698 RM systems
Ref: Tareb,R. et al. Genome Announc 3 (3), e00582-15 (2015)
REBASE ref # 19818
Contig set: 2,966,480 bp
GenBank #: LAZE00000000 (NZ_LAZE00000000)
REBASE acronym: Lrh3698
Org_num: 16278
All begin XA20_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9645 | R | LrhVSI43ORF14060P (99% identity) | Lrh3698ORF9650P | |
| 9650 | M | M.LrhVSI43ORF14060P (100% identity) | M.Lrh3698ORF9650P | |
| 9655 | S | S.LpaTCSORFAP (100% identity) | S.Lrh3698ORF9650P | |
| 9660 | nickase | |||
| 215 | membrane protein | |||
| 220 | S | S2.LrhB442ORF840P (100% identity) | S1.Lrh3698ORF235P | |
| 225 | integrase | |||
| 230 | S | S1.LrhVSI43ORF9640P (79% identity) | S2.Lrh3698ORF235P | |
| 235 | M | M.LrhsA5ORFBP (100% identity) | M.Lrh3698ORF235P | |
| 240 | R | LrhsA5ORFBP (100% identity) | Lrh3698ORF235P | |
| 245 | transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4335 | cytoplasmic protein | |||
| 4340 | M | RM1.Lrh23550ORF10050P (78% identity) | M.Lrh3698ORF4340P | |
| 4345 | integrase | |||
| 4345 | integrase | |||
| 4350 | RM | LrhM12ORF9980P (88% identity) | Lrh3698ORF4350P | |
| 4355 | ATPase family protein | |||
| 4605 | 76 aa hypothetical protein | |||
| 4610 | M | M.LrhM12ORF9535P (100% identity) | M.Lrh3698ORF4610P | |
| 4615 | DNA-binding protein | |||
| 4785 | transposase | |||
| 4790 | M | M.LrhM12ORF9715BP (100% identity) | CTSAG | M.Lrh3698ORF4790P |
| 4795 | 62 aa hypothetical protein | |||
| 2825 | amino acid permease | |||
| 2830 | M | M.LrhsA5ORFDP (100% identity) | M.Lrh3698ORF2830P | |
| 2835 | 653 aa hypothetical protein | |||