Helicobacter pylori 7.13 |
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Putative Helicobacter pylori 7.13 RM systems
Ref: Asim,M. et al. Genome Announc 3 (3), e00641-15 (2015)
REBASE ref # 19802
Contig set: 1,725,435 bp
GenBank #: LAQK00000000 (NZ_LAQK00000000)
REBASE acronym: Hpy713
Org_num: 16330
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | S | S.HpyR3cORF4785P (100% identity) | S.Hpy713ORFDP | |
| ??? | S | S.HpyR3cORF5080P (100% identity) | S.Hpy713ORFGP | |
| ??? | R | HpyR3cORF5080P (100% identity) | Hpy713ORFGP | |
| ??? | M | M.HpyR3cORF5080P (100% identity) | M.Hpy713ORFD1P | |
| ??? | restriction endonuclease subunit M | |||
| ??? | S | S.HpyR3cORF5080P (47% identity) | S.Hpy713ORFEP | |
| ??? | S | S.HpyR3cORF510P (100% identity) | S.Hpy713ORFXP | |
| ??? | R | HpyR3cORF8160P (99% identity) | Hpy713ORFLP | |
| ??? | M | M.HpyR3cORF8160P (100% identity) | M.Hpy713ORFLP | |
| ??? | S | S.HpyB128ORF3P (100% identity) | S.Hpy713ORFLP | |
| ??? | S | S.HpyR3cORF285P (100% identity) | S.Hpy713ORFHP | |
| ??? | S | S.HpyR3cORF5365P (100% identity) | S.Hpy713ORFSP | |
| ??? | M | M.HpyR3cORF5365P (100% identity) | M.Hpy713ORFSP | |
| ??? | R | HpyR3cORF5365P (100% identity) | Hpy713ORFSP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | type I restriction endonuclease | |||
| ??? | M | M.HpyR3cORF5085P (100% identity) | GGCC | M.Hpy713ORFE1P |
| ??? | R | HpyR3cORF5085P (100% identity) | GGCC | Hpy713ORFE1P |
| ??? | RM | 215 aa hypothetical protein, partial | Hpy713ORFQP | |
| ??? | M | M.HpyR3cORF1510P (100% identity) | TCNGA | M.Hpy713ORFAP |
| ??? | R | HpyU408XP (100% identity) | TCNGA | Hpy713ORFAP |
| ??? | M | M.HpyR3cORF1995P (100% identity) | TCNNGA | M.Hpy713ORFBP |
| ??? | R | HpyR3cORF1995P (100% identity) | TCNNGA | Hpy713ORFBP |
| ??? | R | HpyU437IXP (100% identity) | GTNNAC | Hpy713ORFYP |
| ??? | M | M.HpyR3cORF3080P (100% identity) | GTNNAC | M.Hpy713ORFYP |
| ??? | adenosine deaminase | |||
| ??? | M | DNA methyltransferase | TCNGA | M.Hpy713ORFWP |
| ??? | M | M.HpyB8ORF1574P (100% identity) | GAATTC | M.Hpy713ORFVP |
| ??? | DNA methyltransferase | |||
| ??? | RM | HpyB8ORF870P (100% identity) | Hpy713ORFCP | |
| ??? | M | M.HpyR3cORF1800P (100% identity) | GCGC | M.Hpy713ORFRP |
| ??? | M | M.HpyR3cORF1320P (100% identity) | CATG | M.Hpy713ORFZP |
| ??? | R | HpyB8ORF281P (100% identity) | CATG | Hpy713ORFZP |
| ??? | M | M.HpyR3cORF7075P (100% identity) | GATC | M.Hpy713ORFI1P |
| ??? | R | HpyR3cORF5260P (100% identity) | ACGT | Hpy713ORFA1P |
| ??? | M | M.HpyR3cORF5260P (100% identity) | ACGT | M.Hpy713ORFA1P |
| ??? | 170 aa hypothetical protein | |||
| ??? | DNA methyltransferase | |||
| ??? | R | HpyB8ORF1100P (100% identity) | ACNGT | Hpy713ORFB1P |
| ??? | M | M.HpyR3cORF5270P (100% identity) | ACNGT | M.Hpy713ORFB1P |
| ??? | 280 aa hypothetical protein HPB128_193g2 | |||
| ??? | 280 aa hypothetical protein HPB128_193g2 | |||
| ??? | M | M.HpyU423II (100% identity) | ATTAAT | M2.Hpy713ORFC1P |
| ??? | R | HpyR3cORF7290P (100% identity) | GTSAC | Hpy713ORFG1P |
| ??? | M | M.HpyB8ORF1517P (100% identity) | GTSAC | M.Hpy713ORFG1P |
| ??? | 419 aa hypothetical protein | |||
| ??? | type II restriction endonuclease | |||
| ??? | R | HpyR3cORF7300P (100% identity) | CCTC | Hpy713ORFH1P |
| ??? | DNA methyltransferase | |||
| ??? | M | M2.HpyR3cORF7300P (100% identity) | CCTC | M2.Hpy713ORFH1P |
| ??? | R | HpyR3cORF8070P (100% identity) | TGCA | Hpy713ORFMP |
| ??? | M | M.HpyR3cORF6235P (98% identity) | TCGA | M.Hpy713ORFTP |
| ??? | 198 aa hypothetical protein | |||
| ??? | DNA methyltransferase | |||
| ??? | R | HpyB8ORF1299P (100% identity) | CCGG | Hpy713ORFUP |
| ??? | M | M.HpyR3cORF6220P (100% identity) | CCGG | M.Hpy713ORFUP |
| ??? | DEAD/DEAH box helicase | |||
| ??? | RM | HpyR3cORF55P (100% identity) | Hpy713ORFKP | |
| ??? | R | HpyR3cORF145P (100% identity) | CCATC | Hpy713ORFIP |
| ??? | M | M1.HpyR3cORF145P (93% identity) | CCATC | M2.Hpy713ORFIP |
| ??? | M | M2.HpyR3cORF145P (100% identity) | CCATC | M1.Hpy713ORFIP |
| ??? | R | HpyR3cORF3315P (100% identity) | GTAC | Hpy713ORFF1P |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.HpyR3cORF7375P (100% identity) | M.Hpy713ORFPP | |
| ??? | R | HpyR3cORF7375P (100% identity) | Hpy713ORFPP | |
| ??? | M | M.HpyR3cORF7440P (100% identity) | M.Hpy713ORFNP | |
| ??? | R | HpyB8ORF1552P (99% identity) | Hpy713ORFNP | |
| ??? | M | M.HpyR3cORF45P (99% identity) | M.Hpy713ORFJP | |
| ??? | R | HpyR3cORF45P (100% identity) | Hpy713ORFJP | |
| ??? | type IIS restriction/modification enzyme | |||