Nocardia farcinica NCTC11134 |
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Putative Nocardia farcinica NCTC11134 RM systems
Ref: Informatics,Pathogen. unpublished
REBASE ref # 19441
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,648,762 bp | LN868938 |
| plasmid 2: | 2,657,929 bp | LN868939 |
| plasmid 4: | 96,708 bp | LN868941 |
| plasmid 5: | 41,291 bp | LN868942 |
REBASE acronym: Nfa11134
Org_num: 13815
All begin ERS450000_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1330 | Uncharacterized glycosyl hydrolase | |||
| 1332 | R | NfaW6977ORF3175P (100% identity) | GACNNNNNCTAC | Nfa11134IIP |
| 1333 | Uncharacterised protein | |||
| 1334 | EcoKMrr | |||
| ??? | S | S.NfaW6977ORF3175P (100% identity) | GACNNNNNCTAC | S.Nfa11134II |
| 1336 | M | M.NfaW6977ORF3175P (100% identity) | GACNNNNNCTAC | M.Nfa11134II |
| 1337 | Lipase 3 precursor | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 2538 | HTH-type transcriptional repressor KstR2 | |||
| 2539 | M | M.NfaW6977ORF9160P (100% identity) | ATCGAT | M.Nfa11134I |
| 2540 | NADH dehydrogenase | |||
| plasmid 2 | ||||
| 4000 | Uncharacterized protein conserved in bacteria | |||
| 4001 | M | M.NfaW6977ORF16235P (98% identity) | M.Nfa11134ORF4001P | |
| 4002 | V | V.Rrh630ORF4853P (100% identity) | V.Nfa11134ORF4001P | |
| 4003 | Uncharacterised protein | |||
| 5861 | Transcriptional repressor smtB homolog | |||
| 5862 | RM | Nfa469ORF5774P (100% identity) | Nfa11134ORF5862P | |
| 5863 | Uncharacterised protein | |||
| 5912 | Uncharacterised protein | |||
| 5913 | M | M.NfaW6977ORF25615P (100% identity) | M.Nfa11134ORF5913P | |
| 5914 | Uncharacterised protein | |||
| plasmid 4 | ||||
| 6067 | Uncharacterised protein | |||
| 6068 | M | M.NfaW6977ORF29830P (100% identity) | M.Nfa11134ORF6068P | |
| 6069 | Uncharacterised protein | |||
| plasmid 5 | ||||
| 6194 | Bacteriophage protein gp37 | |||
| ??? | M | M.Nsp372ORF29575P (100% identity) | M.Nfa11134ORF6195P | |
| 6196 | Uncharacterised protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1333 | Uncharacterised protein | |||
| 1334 | R | NfaW6977MrrP (94% identity) | Nfa11134MrrP | |
| 1335 | Uncharacterised protein | |||