Neisseria gonorrhoeae FA19 |
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Putative Neisseria gonorrhoeae FA19 RM systems
Ref: Abrams,A.J. et al. unpublished
REBASE ref # 20452
Complete sequence: 2,232,367 bp
GenBank #: CP012026
REBASE acronym: NgoFA19
Org_num: 8042
All begin VT05_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 147 | ADP-L-glycero-D-manno-heptose-6-epimerase | |||
| 148 | M | M.Ngo9399ORF2075P (100% identity) | M.NgoFA19ORF148P | |
| 149 | DNA-damage-inducible protein D | |||
| 150 | S | S.NgoWNII (50% identity) | S1.NgoFA19ORF148P | |
| 151 | S | S2.NgoWSII (100% identity) | S2.NgoFA19ORF148P | |
| 152 | R | NgoWNIIP (100% identity) | NgoFA19ORF148P | |
| 153 | ATP-dependent Clp protease ATP-binding subunit | |||
| 434 | Replication-associated recombination protein A | |||
| ??? | R | NgoPID1ORF461P (100% identity) | GAGNNNNNTAC | NgoFA19IIIP |
| 436 | 77 aa hypothetical protein | |||
| 437 | S | S.Ngos1291I (100% identity) | GAGNNNNNTAC | S.NgoFA19III |
| 438 | 186 aa hypothetical protein | |||
| 439 | 280 aa hypothetical protein | |||
| 440 | M | M.NgoPID1ORF461P (100% identity) | GAGNNNNNTAC | M.NgoFA19III |
| 441 | Riboflavin biosynthesis protein RibBA | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 41 | Phenylalanine--tRNA ligase alpha subunit | |||
| 42 | V | V.NgoWSORF391P (100% identity) | V.NgoFA19ORF43P | |
| ??? | M | M.NgoWSORF391P (100% identity) | M.NgoFA19ORF43P | |
| 45 | R | Npo18661ORFHP (100% identity) | NgoFA19ORF43P | |
| 46 | Phenylalanine--tRNA ligase beta subunit | |||
| 99 | 215 aa hypothetical protein | |||
| 100 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | NgoFA19ORF100P |
| 101 | S | S.Ngo9399ORF1840P (100% identity) | S.NgoFA19ORF100P | |
| 102 | 140 aa hypothetical protein | |||
| 410 | 3-isopropylmalate dehydrogenase | |||
| 411 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | NgoFA19ORF412P |
| 412 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.NgoFA19ORF412P |
| 413 | 3-isopropylmalate dehydratase small subunit 1 | |||
| 666 | Anthranilate synthase component 1 | |||
| 667 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.NgoFA19ORF667P |
| 668 | R | NgoFQ01ORF4235P (99% identity) | GCCGGC | NgoFA19ORF667P |
| 669 | N5-carboxyaminoimidazole ribonucleotide | |||
| 928 | Replication initiation factor | |||
| 929 | V | V.Ngos1291ORF65P (100% identity) | V.NgoFA19ORFKP | |
| ??? | R | NgoWSORF1801P (98% identity) | CCGG | NgoFA19ORFKP |
| ??? | M | M.NgoG2891ORFBP (100% identity) | CCGG | M.NgoFA19ORFKP |
| 933 | 48 aa hypothetical protein | |||
| 1613 | Inner membrane protein YeeA | |||
| ??? | R | NgoWFORF2088P (100% identity) | GGCC | NgoFA19ORF1616P |
| 1616 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.NgoFA19ORF1616P |
| 1617 | Ribosome-recycling factor | |||
| 1714 | 374 aa hypothetical protein | |||
| 1715 | M | M1.Ngo9399ORF10180P (100% identity) | GGTGA | M1.NgoFA19I |
| 1716 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.NgoFA19I |
| 1717 | 30S ribosomal protein S1 | |||
| 1822 | GTPase ObgE/CgtA | |||
| 1823 | M | M.NgoWFORF2310P (100% identity) | RGCGCY | M.NgoFA19ORF1823P |
| 1824 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | NgoFA19ORF1823P |
| 1825 | Cysteine--tRNA ligase | |||
| 2036 | Leucine--tRNA ligase | |||
| 2037 | R | Ngos1291ORF5750P (100% identity) | GATC | NgoFA19ORF2038P |
| ??? | M | M.NgoWOORF8P (100% identity) | GATC | M.NgoFA19ORF2038P |
| 2039 | 151 aa hypothetical protein | |||
| 2037 | Type-2 restriction enzyme DpnI | |||
| ??? | M | M.NgoWSORF8P (100% identity) | GATC | M.NgoFA19ORFFP |
| 2039 | 151 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 282 | Peptidyl-prolyl cis-trans isomerase A precursor | |||
| 283 | M | M.NgoSW0032ORF2780P (100% identity) | CCACC | M.NgoFA19II |
| 284 | R | Ngos1291ORF8455P (99% identity) | CCACC | NgoFA19IIP |
| 285 | tRNA 2-thiocytidine biosynthesis protein TtcA | |||
| 377 | L-lactate dehydrogenase | |||
| 378 | R | Ngo9399ORF5165P (100% identity) | NgoFA19ORF379P | |
| 379 | M | M.Ngo9126ORF3235P (98% identity) | M.NgoFA19ORF379P | |
| 380 | tRNA pseudouridine synthase B | |||