Ref: Abrams,A.J. et al. unpublished

REBASE ref # 20452

Complete sequence: 2,168,698 bp

GenBank #: CP012027

REBASE acronym: Ngo6140

Org_num: 8047

 

All begin WX60_

Type I
ORF Gene Most similar Specificity Name
 
432 Riboflavin biosynthesis protein RibBA
433 M M.NgoWLI (100% identity) GAGNNNNNTAC M.Ngo6140I
434 280 aa hypothetical protein
435 186 aa hypothetical protein
436 S S.Ngos1291ORF9245P (100% identity) GAGNNNNNTAC S.Ngo6140I
437 77 aa hypothetical protein
438 R NgoWOIP (99% identity) GAGNNNNNTAC Ngo6140IP
439 Replication-associated recombination protein A
 
2182 ADP-L-glycero-D-manno-heptose-6-epimerase
2183 M M.NgoWSII (100% identity) GCANNNNNNNNTGC M.Ngo6140ORF2183P
2184 DNA-damage-inducible protein D
2185 S S.NgoWNII (99% identity) GCANNNNNNNNTGC S.Ngo6140ORF2183P
2186 R Type I restriction enzyme R protein GCANNNNNNNNTGC Ngo6140ORF2183P
2187 Type I restriction enzyme R protein
Type II
ORF Gene Most similar Specificity Name
 
268 N5-carboxyaminoimidazole ribonucleotide
269 R NgoWSORF1056P (100% identity) GCCGGC Ngo6140ORF270P
270 M M.NgoWLORF1156P (100% identity) GCCGGC M.Ngo6140ORF270P
271 Anthranilate synthase component 1
 
460 3-isopropylmalate dehydratase small subunit 1
461 M Modification methylase BanI GGNNCC M.Ngo6140ORF461P
462 R NgoWLORF945P (100% identity) GGNNCC Ngo6140ORF461P
463 3-isopropylmalate dehydrogenase
 
687 Replication initiation factor
688 V Very short patch repair protein V.Ngo6140ORF691P
??? R Ngos1291ORF65P (100% identity) CCGG Ngo6140ORF691P
??? M M.NgoWSORF1801P (100% identity) CCGG M.Ngo6140ORF691P
692 48 aa hypothetical protein
 
1375 Inner membrane protein YeeA
1376 R Ngos1291ORF3515P (100% identity) GGCC Ngo6140ORF1377P
1377 M Modification methylase HaeIII GGCC M.Ngo6140ORF1377P
1378 Ribosome-recycling factor
 
1476 Sodium/glutamate symport carrier protein
1477 R 374 aa hypothetical protein GGTGA Ngo6140IIP
1478 M Modification methylase FokI GGTGA M1.Ngo6140II
1479 M M1.NgoWSIII (100% identity) GGTGA M2.Ngo6140II
1480 30S ribosomal protein S1
 
1584 GTPase ObgE/CgtA
1585 M Modification methylase HhaI RGCGCY M.Ngo6140ORF1585P
1586 R HaeII restriction endonuclease RGCGCY Ngo6140ORF1585P
1587 Cysteine--tRNA ligase
 
1789 Leucine--tRNA ligase
1790 R Type-2 restriction enzyme DpnI GATC Ngo6140ORF1790P
1791 Modification methylase DpnIIB
 
1790 Type-2 restriction enzyme DpnI
1791 M M.NgoWSORF8P (100% identity) GATC M.Ngo6140ORF1791P
1792 151 aa hypothetical protein
 
2076 Phenylalanine--tRNA ligase alpha subunit
2077 V Very short patch repair protein V.Ngo6140ORF2078P
??? M M.NgoWSORF391P (100% identity) M.Ngo6140ORF2078P
2080 R NgoWSORF391P (100% identity) Ngo6140ORF2078P
2081 Phenylalanine--tRNA ligase beta subunit
 
2134 215 aa hypothetical protein
2135 RM Restriction enzyme BgcI subunit alpha GACNNNNNTGA Ngo6140ORF2135P
2136 S S.NgoWSORF450P (100% identity) GACNNNNNTGA S.Ngo6140ORF2135P
2137 140 aa hypothetical protein
 
2141 Uroporphyrinogen decarboxylase
2142 H Z1 domain protein H.Ngo6140ORF2144P
2143 R NgoWFORF390P (99% identity) GCSGC Ngo6140ORF2144P
2144 M Modification methylase BspRI GCSGC M.Ngo6140ORF2144P
2145 49 aa hypothetical protein
Type III
ORF Gene Most similar Specificity Name
 
493 tRNA pseudouridine synthase B
??? M M.Ngo34769ORF3345P (98% identity) GCAGA M.Ngo6140ORF494P
496 R NgoWLORF910P (100% identity) GCAGA Ngo6140ORF494P
497 L-lactate dehydrogenase
 
589 tRNA 2-thiocytidine biosynthesis protein TtcA
590 R NgoWSORF647P (100% identity) CCACC Ngo6140ORF591P
591 M methyltransferase CCACC M.Ngo6140ORF591P
592 Peptidyl-prolyl cis-trans isomerase A precursor