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Putative Neisseria gonorrhoeae 35/02 RM systems
Ref: Abrams,A.J. et al. unpublished
REBASE ref # 20452
Complete sequence: 2,173,235 bp
GenBank #: CP012028
REBASE acronym: Ngo3502
Org_num: 8383
All begin WX61_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
1743 | ADP-L-glycero-D-manno-heptose-6-epimerase | |||
1744 | M | M.Ngos1291ORF7750P (100% identity) | M.Ngo3502ORF1744P | |
1745 | DNA-damage-inducible protein D | |||
??? | S | S1.NgoWPORF494P (100% identity) | S1.Ngo3502ORF1744P | |
1746 | S | type-1 restriction enzyme specificity | S2.Ngo3502ORF1744P | |
1747 | S | S2.NgoWSII (100% identity) | S3.Ngo3502ORF1744P | |
1748 | R | NgoWSIIP (100% identity) | Ngo3502ORF1744P | |
1749 | ATP-dependent Clp protease ATP-binding subunit | |||
2218 | Riboflavin biosynthesis protein RibBA | |||
2219 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.Ngo3502III |
2220 | 279 aa hypothetical protein | |||
2221 | 186 aa hypothetical protein | |||
2222 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo3502III |
2223 | 77 aa hypothetical protein | |||
2224 | R | NgoWSIP (86% identity) | GAGNNNNNTAC | Ngo3502IIIP |
1 | Replication-associated recombination protein A | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
24 | 3-isopropylmalate dehydratase small subunit 1 | |||
25 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo3502ORF1214P |
??? | R | NgoWPORF778P (100% identity) | GGNNCC | Ngo3502ORF1214P |
28 | 3-isopropylmalate dehydrogenase | |||
672 | Replication initiation factor | |||
673 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo3502ORFBP | |
??? | R | NgoWSORF1801P (100% identity) | CCGG | Ngo3502ORFBP |
??? | M | M.NgoWSORF1801P (100% identity) | CCGG | M.Ngo3502ORFBP |
677 | 48 aa hypothetical protein | |||
907 | Cysteine--tRNA ligase | |||
908 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo3502ORF1835P |
909 | Modification methylase HhaI | |||
908 | HaeII restriction endonuclease | |||
909 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo3502ORF909P |
910 | GTPase ObgE/CgtA | |||
1008 | 30S ribosomal protein S1 | |||
1009 | M | M1.NgoWSIII (100% identity) | GGTGA | M1.Ngo3502II |
1010 | M | M1.Ngos1291II (100% identity) | GGTGA | M2.Ngo3502II |
1011 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo3502IIP |
1012 | Sodium/glutamate symport carrier protein | |||
1115 | Ribosome-recycling factor | |||
1116 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo3502ORF1116P |
??? | restriction endonuclease NgoPII | |||
1116 | Modification methylase HaeIII | |||
??? | R | NgoWSORF2276P (100% identity) | GGCC | Ngo3502ORF116P |
1119 | Inner membrane protein YeeA | |||
1280 | Leucine--tRNA ligase | |||
1281 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo3502ORF1281P |
??? | DNA methylase N-4 | |||
1281 | Type-2 restriction enzyme DpnI | |||
??? | M | M.NgoWOORF8P (100% identity) | GATC | M.Ngo3502ORFAP |
1283 | 151 aa hypothetical protein | |||
1511 | 62 aa hypothetical protein | |||
1512 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo3502ORF1512P |
1513 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo3502ORF1512P |
1514 | UvrABC system protein A | |||
1637 | Phenylalanine--tRNA ligase alpha subunit | |||
1638 | V | V.NgoWSORF391P (100% identity) | V.Ngo3502ORF1639P | |
??? | M | M.NgoMORF446P (100% identity) | M.Ngo3502ORF1639P | |
1641 | R | NgoWSORF391P (100% identity) | Ngo3502ORF1639P | |
1642 | Phenylalanine--tRNA ligase beta subunit | |||
1695 | 215 aa hypothetical protein | |||
1696 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo3502ORF1696P |
1697 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo3502ORF1696P |
1698 | 140 aa hypothetical protein | |||
1702 | Uroporphyrinogen decarboxylase | |||
1703 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo3502ORF705P | |
1704 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo3502ORF705P |
1705 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo3502ORF705P |
1706 | 54 aa hypothetical protein | |||
2057 | N5-carboxyaminoimidazole ribonucleotide | |||
2058 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo3502ORF2059P |
2059 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.Ngo3502ORF2059P |
2060 | Anthranilate synthase component 1 | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
59 | tRNA pseudouridine synthase B | |||
60 | M | M.Ngo10794ORF3310P (98% identity) | ACACC | M.Ngo3502I |
61 | R | NgoWSORF749P (100% identity) | ACACC | Ngo3502IP |
62 | L-lactate dehydrogenase | |||
154 | tRNA 2-thiocytidine biosynthesis protein TtcA | |||
155 | R | Ngos1291ORF8455P (100% identity) | CCACC | Ngo3502ORF156P |
156 | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.Ngo3502ORF156P |
157 | Peptidyl-prolyl cis-trans isomerase A precursor |