Clostridium carboxidivorans P7 |
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Putative Clostridium carboxidivorans P7 RM systems
Ref: Li,N. et al. unpublished
REBASE ref # 19900
Complete sequence: 5,732,880 bp
GenBank #: CP011803
REBASE acronym: CcaP7
Org_num: 16035
All begin Ccar_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3560 | 430 aa hypothetical protein | |||
| 3565 | R | CcaPORF573P (100% identity) | CCANNNNNNNNTCG | CcaP7IIP |
| 3570 | M | M.CcaPORF573P (100% identity) | CCANNNNNNNNTCG | M.CcaP7II |
| 3575 | S | S.CcaPORF573P (100% identity) | CCANNNNNNNNTCG | S.CcaP7II |
| 3580 | 643 aa hypothetical protein | |||
| 11955 | integrase | |||
| 11960 | S | S.CcaPORF4477P (100% identity) | CAYNNNNNCTGC | S.CcaP7I |
| 11965 | M | M.CcaPORF4477P (98% identity) | CAYNNNNNCTGC | M.CcaP7I |
| 11970 | AAA-ATPase | |||
| 11975 | R | CcaPORF4477P (100% identity) | CAYNNNNNCTGC | CcaP7IP |
| 24295 | restriction endonuclease subunit M | |||
| 24300 | R | CcaPORF2691P (100% identity) | GCANNNNNNNTNNCG | CcaP7IIIP |
| 24305 | S | S.CcaPORF2691P (100% identity) | GCANNNNNNNTNNCG | S.CcaP7III |
| 24310 | M | M.CcaP7TORFDP (100% identity) | GCANNNNNNNTNNCG | M.CcaP7III |
| 24315 | 208 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7115 | 295 aa hypothetical protein | |||
| 7120 | RM | CcaP7TORFFP (100% identity) | CRAAAAR | CcaP7V |
| 7125 | spore protein | |||
| 16655 | 87 aa hypothetical protein | |||
| 16660 | M | M.Cte28ORF20120P (67% identity) | CTSAG | M.CcaP7ORF16660P |
| 16665 | 66 aa hypothetical protein | |||
| 23800 | deoxyribonuclease HsdR | |||
| 23805 | RM | CcaPORF3977P (100% identity) | GATAAT | CcaP7IV |
| 23810 | guanine permease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8695 | 178 aa hypothetical protein | |||
| 8700 | R | CcaPORF140P (100% identity) | GAAAT | CcaP7ORF8705P |
| 8705 | DNA methylase | |||
| 8700 | restriction endonuclease subunit R | |||
| 8705 | M | M.CcaPORF140P (100% identity) | GAAAT | M.CcaP7VII |
| 8710 | 147 aa hypothetical protein | |||
| 17820 | 405 aa hypothetical protein | |||
| 17825 | R | CcaPORF1700P (100% identity) | AGAAGC | CcaP7VIP |
| ??? | M | M.CcaP7TORFAP (100% identity) | AGAAGC | M.CcaP7VI |
| 17835 | 252 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3490 | 139 aa hypothetical protein | |||
| 3495 | R | CspJS66ORF19510P (98% identity) | CcaP7ORF3495P | |
| 3500 | ATPase AAA | |||
| 3515 | DNA methyltransferase | |||
| ??? | R | CcaPMcrB2P (100% identity) | CcaP7McrB2P | |
| 3525 | 568 aa hypothetical protein, partial | |||
| ??? | ATPase associated with various cellular activities AAA_5 | |||
| 3525 | R | 568 aa hypothetical protein, partial | CcaP7McrBP | |
| 3530 | pseudogene | |||