Acinetobacter baumannii SDF |
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Putative Acinetobacter baumannii SDF RM systems
Ref: Vallenet,D. et al. PLoS ONE 3 (3), E1805 (2008)
REBASE ref # 10486
| Sequence length: | GenBank #: | |
| Chromosome: | 3,421,954 bp | CU468230 (NC_010400) |
| plasmid p2ABSDF: | 25,014 bp | CU468232 (NC_010396) |
| plasmid p3ABSDF: | 24,922 bp | CU468233 (NC_010398) |
REBASE acronym: AbaS
Org_num: 4989
All begin ABSDF, ABSDF_p
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3411 | transposase | |||
| 3412 | R | ApiA45PORF18595P (97% identity) | AbaSORF3415P | |
| 3413 | 345 aa conserved hypothetical protein | |||
| 3414 | S | S.Ain564ORF14240P (66% identity) | S.AbaSORF3415P | |
| 3415 | M | M.Abe3393ORF510P (97% identity) | M.AbaSORF3415P | |
| 3416 | 221 aa hypothetical protein | |||
| 3558 | insertion sequence ATP-binding protein | |||
| ??? | S | S.Aha261ORF3150P (56% identity) | S.AbaSORF3561P | |
| 3561 | M | M.Ano1395ORF16200P (88% identity) | M.AbaSORF3561P | |
| 3562 | transposon Tn7-like transposition | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1324 | 133 aa hypothetical protein | |||
| 1325 | M | M.Abas713ORF3515P (99% identity) | M.AbaSORF1325P | |
| 1326 | 164 aa hypothetical protein; putative phage related | |||
| 2773 | 150 aa hypothetical protein; putative exported protein | |||
| 2774 | M | M.AbaZHOUORF50P (78% identity) | M.AbaSORF2774P | |
| 2775 | fragment of putative phage-related DNA adenine | |||
| 3312 | riboflavin synthase alpha chain | |||
| 3313 | M | M.KpnKP59ORFAP (100% identity) | RAATTY | M.AbaSORF3313P |
| 3314 | bifunctional protein [Includes: | |||
| 3355 | fragment of transposase of ISAba6, IS982 family | |||
| 3356 | R | AbaMSP416ORF13183P (97% identity) | C | AbaSI |
| 3357 | fragment of transposase of ISAba7, IS5 family | |||
| plasmid p2ABSDF | ||||
| 20014 | fragment of DNA replication protein | |||
| 20015 | R | Aba1512ORF19585P (99% identity) | CCGG | AbaSORF16P |
| 20016 | M | M.Aba1512ORF19585P (98% identity) | CCGG | M.AbaSORF16P |
| 20017 | fragment of mobilization protein | |||
| plasmid p3ABSDF | ||||
| 30012 | 165 aa conserved hypothetical protein | |||
| 30013 | M | M1.PaeJSEY8ORF12870P (59% identity) | ACTGGG | M1.AbaSORF13P |
| 30014 | M | M2.PaeJSEY8ORF12870P (57% identity) | ACTGGG | M2.AbaSORF13P |
| 30015 | R | PaeJSEY8ORF12870P (70% identity) | ACTGGG | AbaSORF13P |
| 30016 | transposase of ISAba6, IS982 family | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2496 | 45 aa hypothetical protein; putative signal peptide | |||
| 2497 | M | M.Aba118362ORF3010P (85% identity) | GATC | M.AbaSORF2497P |
| 2498 | 309 aa conserved hypothetical protein | |||