Escherichia coli APEC O2 |
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Putative Escherichia coli APEC O2 RM systems
Ref: Mangiamele,P.M. et al. unpublished
REBASE ref # 19767
Complete sequence: 5,114,241 bp
GenBank #: CP006834
REBASE acronym: EcoAPEO2
Org_num: 15735
All begin APECO2_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1110 | endoribonuclease SymE | |||
| 1115 | R | Ecos641ORF3050P (100% identity) | EcoAPEO2ORF1125P | |
| 1120 | S | S.Ecos641ORF3050P (100% identity) | S.EcoAPEO2ORF1125P | |
| 1125 | M | M.Ecos641ORF3050P (100% identity) | M.EcoAPEO2ORF1125P | |
| 1130 | restriction endonuclease | |||
| 27290 | methyltransferase | |||
| 17530 | S | S.SflN101ORF19075P (100% identity) | S.EcoAPEO2ORF17535P | |
| ??? | M | M.SflN101ORF19075P (94% identity) | M.EcoAPEO2ORF17535P | |
| 17540 | extracellular solute-binding protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23335 | cell division protein DamX | |||
| 23340 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoAPEO2DamP |
| 23345 | ribulose-phosphate 3-epimerase | |||
| 915 | 59 aa hypothetical protein | |||
| 920 | R | SflFF17ORF19275P (100% identity) | EcoAPEO2ORF920P | |
| 925 | HNH endonuclease | |||
| 5535 | recombination protein NinB | |||
| 5540 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoAPEO2ORF5540P |
| 5545 | NinE family protein | |||
| 12060 | EamA family transporter | |||
| 12065 | V | V.EcosEC7DcmP (100% identity) | V.EcoAPEO2DcmP | |
| 12070 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.EcoAPEO2DcmP |
| 12075 | phosphohydrolase | |||
| 14360 | protein ninF | |||
| ??? | M | M.EcoF33ORF7490P (100% identity) | GATC | M.EcoAPEO2ORF14365P |
| 14370 | NinE family protein | |||
| 14370 | NinE family protein | |||
| 14375 | M | M.EcoTrh52ORF21975P (100% identity) | GATC | M.EcoAPEO2ORF14375P |
| 14380 | recombination protein NinB | |||
| 19805 | Fis family transcriptional regulator | |||
| 19810 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.EcoAPEO2ORF19810P |
| 19815 | DUF2556 domain-containing protein | |||
| 20350 | phage portal protein | |||
| 20355 | R | Eho218ORF15P (100% identity) | GTCGAC | EcoAPEO2ORF20360P |
| ??? | M | M.Eco63538ORFDP (98% identity) | GTCGAC | M.EcoAPEO2ORF20360P |
| 20365 | replication endonuclease | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 26205 | DNA invertase | |||
| 7875 | R | EcoSW4848GmrSD2P (100% identity) | EcoAPEO2GmrSDP | |
| 26210 | 0 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7680 | PerC family transcriptional regulator | |||
| 7685 | M | M.EcoR15ORF19935P (100% identity) | GATC | M.EcoAPEO2ORF7685P |
| 7690 | LexA family transcriptional regulator | |||