Photorhabdus temperata subsp. thracensis DSM 15199 |
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Putative Photorhabdus temperata subsp. thracensis DSM 15199 RM systems
Ref: Kwak,Y. and Shin,J.-H. unpublished
REBASE ref # 18373
Complete sequence: 5,147,098 bp
GenBank #: CP011104
REBASE acronym: Pte15199
Org_num: 15760
All begin VY86_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 8715 | metal-dependent hydrolase | |||
| 8720 | R | PteHmORF4320P (95% identity) | Pte15199ORF8730P | |
| 8725 | S | S1.PteHmORF4320P (64% identity) | S.Pte15199ORF8730P | |
| 8730 | M | M.PteHmORF4320P (95% identity) | M.Pte15199ORF8730P | |
| 8735 | 409 aa hypothetical protein | |||
| 10735 | 101 aa hypothetical protein | |||
| 10740 | R | PheVMGORF8010P (91% identity) | Pte15199ORF10755P | |
| 10745 | transporter | |||
| 10750 | S | S.Sen21591ORF21065P (67% identity) | S.Pte15199ORF10755P | |
| 10755 | M | M.PheVMGORF8010P (90% identity) | M.Pte15199ORF10755P | |
| 10760 | 61 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8330 | ribulose-phosphate 3-epimerase | |||
| 8335 | M | M.PteMeg1DamP (99% identity) | GATC | M.Pte15199DamP |
| 8340 | membrane protein | |||
| 9685 | pseudogene | |||
| 9690 | R | PteMeg1ORF4174P (84% identity) | CTGCAG | Pte15199ORF9695P |
| 9695 | M | M.PteMeg1ORF4174P (87% identity) | CTGCAG | M.Pte15199ORF9695P |
| 9700 | type IV secretion protein Rhs | |||
| 9870 | type VI secretion protein IcmF | |||
| 9875 | M | M.PluTIV (94% identity) | CCWGG | M.Pte15199ORF9875P |
| 9880 | V | V.PluTIVP (89% identity) | V.Pte15199ORF9875P | |
| 9885 | R | PluTIVP (89% identity) | CCWGG | Pte15199ORF9875P |
| 9890 | transposase | |||
| 11640 | unnamed protein product | |||
| 11645 | M | M.PluHP88ORF18770P (99% identity) | M.Pte15199ORF11645P | |
| 11650 | holin | |||
| 17670 | pseudogene | |||
| 17675 | M | M.Pte2ORF22960P (96% identity) | M.Pte15199ORF17675P | |
| 17680 | membrane protein | |||
| 17965 | GMP synthase | |||
| ??? | M | M.PteHmORF780P (95% identity) | CCWGG | M.Pte15199ORF17970P |
| 17975 | 74 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7465 | replication protein A | |||
| 7470 | M | M.Plu124ORF24530P (94% identity) | GATC | M.Pte15199ORF7470P |
| 7475 | 67 aa hypothetical protein | |||