Campylobacter jejuni subsp. jejuni C1-5523 |
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Putative Campylobacter jejuni subsp. jejuni C1-5523 RM systems
Ref: Shyaka,A. et al. unpublished
REBASE ref # 19573
Contig set: 1,727,597 bp
GenBank #: JYDX00000000 (NZ_JYDX00000000)
REBASE acronym: Cje5523
Org_num: 15711
All begin TM01_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 8425 | 292 aa hypothetical protein | |||
| 8430 | R | Csp4321ORF9650P (100% identity) | Cje5523ORF8455P | |
| 8435 | 472 aa hypothetical protein | |||
| 8440 | S | S1.CjeCJ017ORFBP (99% identity) | S1.Cje5523ORF8455P | |
| 8445 | S | S2.Csp6874ORF7540P (100% identity) | S2.Cje5523ORF8455P | |
| ??? | S | 83 aa hypothetical protein | S3.Cje5523ORF8455P | |
| 8450 | addiction module protein | |||
| 8455 | M | M.CjeCJ017ORFBP (99% identity) | M.Cje5523ORF8455P | |
| 8460 | carboxymuconolactone decarboxylase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5165 | translation initiation factor IF-3 | |||
| 5170 | M | M.Csp6467ORF2945P (100% identity) | GAATTC | M.Cje5523ORF5170P |
| 5175 | N-acetyl-gamma-glutamyl-phosphate reductase | |||
| 3675 | pseudogene | |||
| 3680 | RM | Cje3791ORF10680P (99% identity) | Cje5523ORF3680P | |
| 3685 | pseudogene | |||
| 4995 | histidine phosphotransferase | |||
| 5000 | R | Csp6467ORF5590P (99% identity) | GGTGA | Cje5523ORF5005P |
| 5005 | M | M2.Csp6467ORF5590P (100% identity) | GGTGA | M1.Cje5523ORF5005P |
| 5010 | M | M1.Csp6467ORF5590P (100% identity) | GGTGA | M2.Cje5523ORF5005P |
| 5015 | polyphosphate kinase | |||
| 875 | DNA strand exchange inhibitor protein | |||
| 880 | RM | Csp6467ORF8335P (99% identity) | GAGNNNNNGT | Cje5523ORF880P |
| 885 | NAD-dependent deacetylase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 320 | ipid-A-disaccharide synthase | |||
| 325 | R | Csp6467ORF6540P (99% identity) | Cje5523ORF340P | |
| 330 | 91 aa hypothetical protein | |||
| 335 | 307 aa hypothetical protein | |||
| 340 | M | M.Csp6467ORF6540P (100% identity) | M.Cje5523ORF340P | |
| 345 | pseudogene | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7260 | membrane protein | |||
| 7265 | R | Csp4324McrCP (96% identity) | Cje5523McrCP | |
| 7270 | R | Cje6456McrBP (91% identity) | Cje5523McrBP | |
| 7275 | ribosome maturation protein RimP | |||